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Journal Abstract Search

154 related items for PubMed ID: 31283336

  • 1. Base-Pair Mismatch Can Destabilize Small DNA Loops through Cooperative Kinking.
    Jeong J, Kim HD.
    Phys Rev Lett; 2019 May 31; 122(21):218101. PubMed ID: 31283336
    [Abstract] [Full Text] [Related]

  • 2. Sequence dependence of the stability of RNA hairpin molecules with six nucleotide loops.
    Vecenie CJ, Morrow CV, Zyra A, Serra MJ.
    Biochemistry; 2006 Feb 07; 45(5):1400-7. PubMed ID: 16445282
    [Abstract] [Full Text] [Related]

  • 3. Two conformational states in D-shaped DNA: Effects of local denaturation.
    Lee OC, Kim C, Kim JY, Lee NK, Sung W.
    Sci Rep; 2016 Jun 24; 6():28239. PubMed ID: 27339114
    [Abstract] [Full Text] [Related]

  • 4. Spontaneous sharp bending of DNA: role of melting bubbles.
    Yuan C, Rhoades E, Lou XW, Archer LA.
    Nucleic Acids Res; 2006 Jun 24; 34(16):4554-60. PubMed ID: 16954151
    [Abstract] [Full Text] [Related]

  • 5. Studying DNA looping by single-molecule FRET.
    Le TT, Kim HD.
    J Vis Exp; 2014 Jun 28; (88):e51667. PubMed ID: 24998459
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  • 8. Enhanced thermal stability and mismatch discrimination of mutation-carrying DNA duplexes and their kinetic and thermodynamic properties in microchannel laminar flow.
    Nagata MP, Yamashita K, Miyazaki M, Nakamura H, Maeda H.
    Anal Biochem; 2009 Jul 01; 390(1):38-45. PubMed ID: 19332018
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  • 9. DNA bending and unbending by MutS govern mismatch recognition and specificity.
    Wang H, Yang Y, Schofield MJ, Du C, Fridman Y, Lee SD, Larson ED, Drummond JT, Alani E, Hsieh P, Erie DA.
    Proc Natl Acad Sci U S A; 2003 Dec 09; 100(25):14822-7. PubMed ID: 14634210
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  • 10. A rule of seven in Watson-Crick base-pairing of mismatched sequences.
    Cisse II, Kim H, Ha T.
    Nat Struct Mol Biol; 2012 May 13; 19(6):623-7. PubMed ID: 22580558
    [Abstract] [Full Text] [Related]

  • 11. Effect of single central base pair mismatch on the conformation and stability of surface immobilized DNA: molecular dynamics studies.
    Wang Z, He N, Li S.
    J Nanosci Nanotechnol; 2009 Nov 13; 9(11):6465-9. PubMed ID: 19908550
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  • 12. Effect of 6-thioguanine on the stability of duplex DNA.
    Bohon J, de los Santos CR.
    Nucleic Acids Res; 2005 Nov 13; 33(9):2880-6. PubMed ID: 15905476
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  • 13. Euler buckling and nonlinear kinking of double-stranded DNA.
    Fields AP, Meyer EA, Cohen AE.
    Nucleic Acids Res; 2013 Nov 13; 41(21):9881-90. PubMed ID: 23956222
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  • 14. Mismatch-induced DNA unbending upon duplex opening.
    Yuan C, Rhoades E, Heuer DM, Archer LA.
    Biophys J; 2005 Oct 13; 89(4):2564-73. PubMed ID: 16085769
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  • 17. Modeling DNA-Strand Displacement Reactions in the Presence of Base-Pair Mismatches.
    Irmisch P, Ouldridge TE, Seidel R.
    J Am Chem Soc; 2020 Jul 01; 142(26):11451-11463. PubMed ID: 32496760
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  • 19. Design of hidden thermodynamic driving for non-equilibrium systems via mismatch elimination during DNA strand displacement.
    Haley NEC, Ouldridge TE, Mullor Ruiz I, Geraldini A, Louis AA, Bath J, Turberfield AJ.
    Nat Commun; 2020 May 22; 11(1):2562. PubMed ID: 32444600
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