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Journal Abstract Search

201 related items for PubMed ID: 31376777

  • 21. Reconstructing genome-wide protein-protein interaction networks using multiple strategies with homologous mapping.
    Lo YS, Huang SH, Luo YC, Lin CY, Yang JM.
    PLoS One; 2015; 10(1):e0116347. PubMed ID: 25602759
    [Abstract] [Full Text] [Related]

  • 22. DPCMNE: Detecting Protein Complexes From Protein-Protein Interaction Networks Via Multi-Level Network Embedding.
    Meng X, Xiang J, Zheng R, Wu FX, Li M.
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(3):1592-1602. PubMed ID: 33417563
    [Abstract] [Full Text] [Related]

  • 23. A partially shared joint clustering framework for detecting protein complexes from multiple state-specific signed interaction networks.
    Zhan Y, Liu J, Wu M, Tan CSH, Li X, Ou-Yang L.
    Comput Biol Med; 2023 Jun; 159():106936. PubMed ID: 37105110
    [Abstract] [Full Text] [Related]

  • 24. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 25. Protein Complexes Detection Based on Semi-Supervised Network Embedding Model.
    Zhu J, Zheng Z, Yang M, Fung GPC, Huang C.
    IEEE/ACM Trans Comput Biol Bioinform; 2021 Oct; 18(2):797-803. PubMed ID: 31581089
    [Abstract] [Full Text] [Related]

  • 26. Identifying protein complexes based on brainstorming strategy.
    Shen X, Zhou J, Yi L, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():44-53. PubMed ID: 27405005
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  • 27. Detection of dynamic protein complexes through Markov Clustering based on Elephant Herd Optimization Approach.
    Rani RR, Ramyachitra D, Brindhadevi A.
    Sci Rep; 2019 Jul 31; 9(1):11106. PubMed ID: 31366992
    [Abstract] [Full Text] [Related]

  • 28. Detecting temporal protein complexes from dynamic protein-protein interaction networks.
    Ou-Yang L, Dai DQ, Li XL, Wu M, Zhang XF, Yang P.
    BMC Bioinformatics; 2014 Oct 04; 15(1):335. PubMed ID: 25282536
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  • 29. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
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  • 30. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov 01; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 31. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 32. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
    Dimitrakopoulos C, Theofilatos K, Pegkas A, Likothanassis S, Mavroudi S.
    Artif Intell Med; 2016 Jul 12; 71():62-9. PubMed ID: 27506132
    [Abstract] [Full Text] [Related]

  • 33. Protein complexes identification based on go attributed network embedding.
    Xu B, Li K, Zheng W, Liu X, Zhang Y, Zhao Z, He Z.
    BMC Bioinformatics; 2018 Dec 20; 19(1):535. PubMed ID: 30572820
    [Abstract] [Full Text] [Related]

  • 34. Detecting Essential Proteins Based on Network Topology, Gene Expression Data, and Gene Ontology Information.
    Zhang W, Xu J, Li Y, Zou X.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Dec 20; 15(1):109-116. PubMed ID: 28650821
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  • 35. Neighbor affinity based algorithm for discovering temporal protein complex from dynamic PPI network.
    Shen X, Yi L, Jiang X, Zhao Y, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():90-96. PubMed ID: 27320204
    [Abstract] [Full Text] [Related]

  • 36. A three-phase method for identifying functionally related protein groups in weighted PPI networks.
    Grbić M, Matić D, Kartelj A, Vračević S, Filipović V.
    Comput Biol Chem; 2020 Jun 01; 86():107246. PubMed ID: 32339914
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  • 37. A novel essential protein identification method based on PPI networks and gene expression data.
    Zhong J, Tang C, Peng W, Xie M, Sun Y, Tang Q, Xiao Q, Yang J.
    BMC Bioinformatics; 2021 May 13; 22(1):248. PubMed ID: 33985429
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  • 38. Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach.
    Mukhopadhyay A, Ray S, De M.
    Mol Biosyst; 2012 Nov 13; 8(11):3036-48. PubMed ID: 22990765
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  • 39. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Nov 13; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
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  • 40. Integrating experimental and literature protein-protein interaction data for protein complex prediction.
    Zhang Y, Lin H, Yang Z, Wang J.
    BMC Genomics; 2015 Nov 13; 16 Suppl 2(Suppl 2):S4. PubMed ID: 25708571
    [Abstract] [Full Text] [Related]

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