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209 related items for PubMed ID: 31531351

  • 1. Identifying Protein Complexes from Dynamic Temporal Interval Protein-Protein Interaction Networks.
    Zhang J, Zhong C, Lin HX, Wang M.
    Biomed Res Int; 2019; 2019():3726721. PubMed ID: 31531351
    [Abstract] [Full Text] [Related]

  • 2. A method for identifying protein complexes with the features of joint co-localization and joint co-expression in static PPI networks.
    Zhang J, Zhong C, Huang Y, Lin HX, Wang M.
    Comput Biol Med; 2019 Aug; 111():103333. PubMed ID: 31376777
    [Abstract] [Full Text] [Related]

  • 3. Construction of dynamic probabilistic protein interaction networks for protein complex identification.
    Zhang Y, Lin H, Yang Z, Wang J.
    BMC Bioinformatics; 2016 Apr 27; 17(1):186. PubMed ID: 27117946
    [Abstract] [Full Text] [Related]

  • 4. A method for predicting protein complex in dynamic PPI networks.
    Zhang Y, Lin H, Yang Z, Wang J, Liu Y, Sang S.
    BMC Bioinformatics; 2016 Jul 25; 17 Suppl 7(Suppl 7):229. PubMed ID: 27454775
    [Abstract] [Full Text] [Related]

  • 5. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Jul 25; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 6. Protein complex prediction in large ontology attributed protein-protein interaction networks.
    Zhang Y, Lin H, Yang Z, Wang J, Li Y, Xu B.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Jul 25; 10(3):729-41. PubMed ID: 24091405
    [Abstract] [Full Text] [Related]

  • 7. Identification of Protein Complexes by Using a Spatial and Temporal Active Protein Interaction Network.
    Li M, Meng X, Zheng R, Wu FX, Li Y, Pan Y, Wang J.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Jul 25; 17(3):817-827. PubMed ID: 28885159
    [Abstract] [Full Text] [Related]

  • 8. A Method for Predicting Protein Complexes from Dynamic Weighted Protein-Protein Interaction Networks.
    Liu L, Sun X, Song W, Du C.
    J Comput Biol; 2018 Jun 25; 25(6):586-605. PubMed ID: 29668304
    [Abstract] [Full Text] [Related]

  • 9. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar 25; 15(2):177-94. PubMed ID: 23780996
    [Abstract] [Full Text] [Related]

  • 10. An uncertain model-based approach for identifying dynamic protein complexes in uncertain protein-protein interaction networks.
    Zhang Y, Lin H, Yang Z, Wang J, Liu Y.
    BMC Genomics; 2017 Oct 16; 18(Suppl 7):743. PubMed ID: 29513194
    [Abstract] [Full Text] [Related]

  • 11. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
    Li M, Wu X, Wang J, Pan Y.
    BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308
    [Abstract] [Full Text] [Related]

  • 12. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 13. Detecting temporal protein complexes from dynamic protein-protein interaction networks.
    Ou-Yang L, Dai DQ, Li XL, Wu M, Zhang XF, Yang P.
    BMC Bioinformatics; 2014 Oct 04; 15(1):335. PubMed ID: 25282536
    [Abstract] [Full Text] [Related]

  • 14. Mining Temporal Protein Complex Based on the Dynamic PIN Weighted with Connected Affinity and Gene Co-Expression.
    Shen X, Yi L, Jiang X, He T, Hu X, Yang J.
    PLoS One; 2016 Oct 04; 11(4):e0153967. PubMed ID: 27100396
    [Abstract] [Full Text] [Related]

  • 15. Neighbor affinity based algorithm for discovering temporal protein complex from dynamic PPI network.
    Shen X, Yi L, Jiang X, Zhao Y, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():90-96. PubMed ID: 27320204
    [Abstract] [Full Text] [Related]

  • 16. A Novel Core-Attachment-Based Method to Identify Dynamic Protein Complexes Based on Gene Expression Profiles and PPI Networks.
    Xiao Q, Luo P, Li M, Wang J, Wu FX.
    Proteomics; 2019 Mar 01; 19(5):e1800129. PubMed ID: 30650262
    [Abstract] [Full Text] [Related]

  • 17. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 18. Temporal Protein Complex Identification Based on Dynamic Heterogeneous Protein Information Network Representation Learning.
    Li Z, Zhang Y, Zhou P.
    IEEE/ACM Trans Comput Biol Bioinform; 2024 Oct 12; 21(5):1154-1164. PubMed ID: 38190662
    [Abstract] [Full Text] [Related]

  • 19. Protein Complexes Detection Based on Semi-Supervised Network Embedding Model.
    Zhu J, Zheng Z, Yang M, Fung GPC, Huang C.
    IEEE/ACM Trans Comput Biol Bioinform; 2021 Oct 12; 18(2):797-803. PubMed ID: 31581089
    [Abstract] [Full Text] [Related]

  • 20. Utilizing both topological and attribute information for protein complex identification in PPI networks.
    Hu AL, Chan KC.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Oct 12; 10(3):780-92. PubMed ID: 24091410
    [Abstract] [Full Text] [Related]

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