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Journal Abstract Search

211 related items for PubMed ID: 31835789

  • 1. Common Secondary and Tertiary Structural Features of Aptamer-Ligand Interaction Shared by RNA Aptamers with Different Primary Sequences.
    Ilgu M, Yan S, Khounlo RM, Lamm MH, Nilsen-Hamilton M.
    Molecules; 2019 Dec 11; 24(24):. PubMed ID: 31835789
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  • 3. Investigating the malleability of RNA aptamers.
    Ilgu M, Wang T, Lamm MH, Nilsen-Hamilton M.
    Methods; 2013 Sep 15; 63(2):178-87. PubMed ID: 23535583
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  • 4. Specificity and Ligand Affinities of the Cocaine Aptamer: Impact of Structural Features and Physiological NaCl.
    Sachan A, Ilgu M, Kempema A, Kraus GA, Nilsen-Hamilton M.
    Anal Chem; 2016 Aug 02; 88(15):7715-23. PubMed ID: 27348073
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  • 6. Atomic-scale characterization of conformational changes in the preQ₁ riboswitch aptamer upon ligand binding.
    Petrone PM, Dewhurst J, Tommasi R, Whitehead L, Pomerantz AK.
    J Mol Graph Model; 2011 Sep 02; 30():179-85. PubMed ID: 21831681
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  • 8. A highly specific sodium aptamer probed by 2-aminopurine for robust Na+ sensing.
    Zhou W, Ding J, Liu J.
    Nucleic Acids Res; 2016 Dec 01; 44(21):10377-10385. PubMed ID: 27655630
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  • 9. Optimization of Experimental Parameters to Explore Small-Ligand/Aptamer Interactions through Use of (1) H NMR Spectroscopy and Molecular Modeling.
    Souard F, Perrier S, Noël V, Fave C, Fiore E, Peyrin E, Garcia J, Vanhaverbeke C.
    Chemistry; 2015 Oct 26; 21(44):15740-8. PubMed ID: 26356596
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  • 10. In silico design and validation of high-affinity RNA aptamers targeting epithelial cellular adhesion molecule dimers.
    Bell DR, Weber JK, Yin W, Huynh T, Duan W, Zhou R.
    Proc Natl Acad Sci U S A; 2020 Apr 14; 117(15):8486-8493. PubMed ID: 32234785
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  • 11. NMR resonance assignments for the class II GTP binding RNA aptamer in complex with GTP.
    Wolter AC, Duchardt-Ferner E, Nasiri AH, Hantke K, Wunderlich CH, Kreutz C, Wöhnert J.
    Biomol NMR Assign; 2016 Apr 14; 10(1):101-5. PubMed ID: 26373429
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  • 12. Folding of the silver aptamer in a DNAzyme probed by 2-aminopurine fluorescence.
    Saran R, Yao L, Hoang P, Liu J.
    Biochimie; 2018 Feb 14; 145():145-150. PubMed ID: 28711684
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  • 13. Heterogeneity and dynamics of the ligand recognition mode in purine-sensing riboswitches.
    Jain N, Zhao L, Liu JD, Xia T.
    Biochemistry; 2010 May 04; 49(17):3703-14. PubMed ID: 20345178
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  • 14. Engineering a structure switching mechanism into a steroid-binding aptamer and hydrodynamic analysis of the ligand binding mechanism.
    Reinstein O, Neves MA, Saad M, Boodram SN, Lombardo S, Beckham SA, Brouwer J, Audette GF, Groves P, Wilce MC, Johnson PE.
    Biochemistry; 2011 Nov 01; 50(43):9368-76. PubMed ID: 21942676
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  • 15. Quinine binding by the cocaine-binding aptamer. Thermodynamic and hydrodynamic analysis of high-affinity binding of an off-target ligand.
    Reinstein O, Yoo M, Han C, Palmo T, Beckham SA, Wilce MC, Johnson PE.
    Biochemistry; 2013 Dec 03; 52(48):8652-62. PubMed ID: 24175947
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  • 16. Structure-affinity relationship of the cocaine-binding aptamer with quinine derivatives.
    Slavkovic S, Altunisik M, Reinstein O, Johnson PE.
    Bioorg Med Chem; 2015 May 15; 23(10):2593-7. PubMed ID: 25858454
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  • 17. In silico selection of RNA aptamers.
    Chushak Y, Stone MO.
    Nucleic Acids Res; 2009 Jul 15; 37(12):e87. PubMed ID: 19465396
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  • 18. Methods for Improving Aptamer Binding Affinity.
    Hasegawa H, Savory N, Abe K, Ikebukuro K.
    Molecules; 2016 Mar 28; 21(4):421. PubMed ID: 27043498
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  • 19. Entropy and Mg2+ control ligand affinity and specificity in the malachite green binding RNA aptamer.
    Bernard Da Costa J, Dieckmann T.
    Mol Biosyst; 2011 Jul 28; 7(7):2156-63. PubMed ID: 21523267
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