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Journal Abstract Search

199 related items for PubMed ID: 31937595

  • 1. Guidance Document: Validation of a High-Performance Liquid Chromatography-Tandem Mass Spectrometry Immunopeptidomics Assay for the Identification of HLA Class I Ligands Suitable for Pharmaceutical Therapies.
    Ghosh M, Gauger M, Marcu A, Nelde A, Denk M, Schuster H, Rammensee HG, Stevanović S.
    Mol Cell Proteomics; 2020 Mar; 19(3):432-443. PubMed ID: 31937595
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  • 2. Sensitive Immunopeptidomics by Leveraging Available Large-Scale Multi-HLA Spectral Libraries, Data-Independent Acquisition, and MS/MS Prediction.
    Pak H, Michaux J, Huber F, Chong C, Stevenson BJ, Müller M, Coukos G, Bassani-Sternberg M.
    Mol Cell Proteomics; 2021 Mar; 20():100080. PubMed ID: 33845167
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  • 3. Benchmarking Bioinformatics Pipelines in Data-Independent Acquisition Mass Spectrometry for Immunopeptidomics.
    Shahbazy M, Ramarathinam SH, Illing PT, Jappe EC, Faridi P, Croft NP, Purcell AW.
    Mol Cell Proteomics; 2023 Apr; 22(4):100515. PubMed ID: 36796644
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  • 5. FASTMAP-a flexible and scalable immunopeptidomics pipeline for HLA- and antigen-specific T-cell epitope mapping based on artificial antigen-presenting cells.
    Weisbrod L, Capriotti L, Hofmann M, Spieler V, Dersch H, Voedisch B, Schmidt P, Knake S.
    Front Immunol; 2024 Apr; 15():1386160. PubMed ID: 38779658
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  • 6. Soluble HLA peptidome of pleural effusions is a valuable source for tumor antigens.
    Khazan-Kost S, Cafri G, Melamed Kadosh D, Mooshayef N, Chatterji S, Dominissini D, Manor S, Zisser B, Broday L, Talalai E, Shemer A, Zadok O, Ofek E, Onn A, Admon A, Peled M.
    J Immunother Cancer; 2022 May; 10(5):. PubMed ID: 35580925
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  • 7. Crucial Parameters for Immunopeptidome Characterization: A Systematic Evaluation.
    Juanes-Velasco P, Arias-Hidalgo C, García-Vaquero ML, Sotolongo-Ravelo J, Paíno T, Lécrevisse Q, Landeira-Viñuela A, Góngora R, Hernández ÁP, Fuentes M.
    Int J Mol Sci; 2024 Sep 03; 25(17):. PubMed ID: 39273511
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  • 8. Biogenesis of HLA Ligand Presentation in Immune Cells Upon Activation Reveals Changes in Peptide Length Preference.
    Marino F, Semilietof A, Michaux J, Pak HS, Coukos G, Müller M, Bassani-Sternberg M.
    Front Immunol; 2020 Sep 03; 11():1981. PubMed ID: 32983136
    [Abstract] [Full Text] [Related]

  • 9. Identification of Immunodominant HIV-1 Epitopes Presented by HLA-C*12:02, a Protective Allele, Using an Immunopeptidomics Approach.
    Chikata T, Paes W, Akahoshi T, Partridge T, Murakoshi H, Gatanaga H, Ternette N, Oka S, Borrow P, Takiguchi M.
    J Virol; 2019 Sep 01; 93(17):. PubMed ID: 31217245
    [Abstract] [Full Text] [Related]

  • 10. Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics.
    Wilhelm M, Zolg DP, Graber M, Gessulat S, Schmidt T, Schnatbaum K, Schwencke-Westphal C, Seifert P, de Andrade Krätzig N, Zerweck J, Knaute T, Bräunlein E, Samaras P, Lautenbacher L, Klaeger S, Wenschuh H, Rad R, Delanghe B, Huhmer A, Carr SA, Clauser KR, Krackhardt AM, Reimer U, Kuster B.
    Nat Commun; 2021 Jun 07; 12(1):3346. PubMed ID: 34099720
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  • 11. Proteogenomic Analysis Unveils the HLA Class I-Presented Immunopeptidome in Melanoma and EGFR-Mutant Lung Adenocarcinoma.
    Qi YA, Maity TK, Cultraro CM, Misra V, Zhang X, Ade C, Gao S, Milewski D, Nguyen KD, Ebrahimabadi MH, Hanada KI, Khan J, Sahinalp C, Yang JC, Guha U.
    Mol Cell Proteomics; 2021 Jun 07; 20():100136. PubMed ID: 34391887
    [Abstract] [Full Text] [Related]

  • 12. Mapping the tumour human leukocyte antigen (HLA) ligandome by mass spectrometry.
    Freudenmann LK, Marcu A, Stevanović S.
    Immunology; 2018 Jul 07; 154(3):331-345. PubMed ID: 29658117
    [Abstract] [Full Text] [Related]

  • 13. High-throughput and Sensitive Immunopeptidomics Platform Reveals Profound Interferonγ-Mediated Remodeling of the Human Leukocyte Antigen (HLA) Ligandome.
    Chong C, Marino F, Pak H, Racle J, Daniel RT, Müller M, Gfeller D, Coukos G, Bassani-Sternberg M.
    Mol Cell Proteomics; 2018 Mar 07; 17(3):533-548. PubMed ID: 29242379
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  • 17. Acid Stripping after Infection Improves the Detection of Viral HLA Class I Natural Ligands Identified by Mass Spectrometry.
    Lorente E, Marcilla M, de la Sota PG, Quijada-Freire A, Mir C, López D.
    Int J Mol Sci; 2021 Sep 29; 22(19):. PubMed ID: 34638844
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  • 18. Direct interrogation of viral peptides presented by the class I HLA of HIV-infected T cells.
    Yaciuk JC, Skaley M, Bardet W, Schafer F, Mojsilovic D, Cate S, Stewart CJ, McMurtrey C, Jackson KW, Buchli R, Olvera A, Cedeño S, Plana M, Mothe B, Brander C, West JT, Hildebrand WH.
    J Virol; 2014 Nov 29; 88(22):12992-3004. PubMed ID: 25165114
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  • 20. HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy.
    Marcu A, Bichmann L, Kuchenbecker L, Kowalewski DJ, Freudenmann LK, Backert L, Mühlenbruch L, Szolek A, Lübke M, Wagner P, Engler T, Matovina S, Wang J, Hauri-Hohl M, Martin R, Kapolou K, Walz JS, Velz J, Moch H, Regli L, Silginer M, Weller M, Löffler MW, Erhard F, Schlosser A, Kohlbacher O, Stevanović S, Rammensee HG, Neidert MC.
    J Immunother Cancer; 2021 Apr 29; 9(4):. PubMed ID: 33858848
    [Abstract] [Full Text] [Related]

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