These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

288 related items for PubMed ID: 32018112

  • 1. Variable impact of conformationally distinct DNA lesions on nucleosome structure and dynamics: Implications for nucleotide excision repair.
    Cai Y, Geacintov NE, Broyde S.
    DNA Repair (Amst); 2020 Mar; 87():102768. PubMed ID: 32018112
    [Abstract] [Full Text] [Related]

  • 2. Synergistic effects of H3 and H4 nucleosome tails on structure and dynamics of a lesion-containing DNA: Binding of a displaced lesion partner base to the H3 tail for GG-NER recognition.
    Cai Y, Fu I, Geacintov NE, Zhang Y, Broyde S.
    DNA Repair (Amst); 2018 May; 65():73-78. PubMed ID: 29631253
    [Abstract] [Full Text] [Related]

  • 3. Nucleosome Histone Tail Conformation and Dynamics: Impacts of Lysine Acetylation and a Nearby Minor Groove Benzo[a]pyrene-Derived Lesion.
    Fu I, Cai Y, Geacintov NE, Zhang Y, Broyde S.
    Biochemistry; 2017 Apr 11; 56(14):1963-1973. PubMed ID: 28304160
    [Abstract] [Full Text] [Related]

  • 4. Nucleotide Excision Repair and Impact of Site-Specific 5',8-Cyclopurine and Bulky DNA Lesions on the Physical Properties of Nucleosomes.
    Shafirovich V, Kolbanovskiy M, Kropachev K, Liu Z, Cai Y, Terzidis MA, Masi A, Chatgilialoglu C, Amin S, Dadali A, Broyde S, Geacintov NE.
    Biochemistry; 2019 Feb 12; 58(6):561-574. PubMed ID: 30570250
    [Abstract] [Full Text] [Related]

  • 5. Molecular dynamics simulations reveal how H3K56 acetylation impacts nucleosome structure to promote DNA exposure for lesion sensing.
    Fu I, Geacintov NE, Broyde S.
    DNA Repair (Amst); 2021 Nov 12; 107():103201. PubMed ID: 34399316
    [Abstract] [Full Text] [Related]

  • 6. DNA adducts from a tumorigenic metabolite of benzo[a]pyrene block human RNA polymerase II elongation in a sequence- and stereochemistry-dependent manner.
    Perlow RA, Kolbanovskii A, Hingerty BE, Geacintov NE, Broyde S, Scicchitano DA.
    J Mol Biol; 2002 Aug 02; 321(1):29-47. PubMed ID: 12139931
    [Abstract] [Full Text] [Related]

  • 7. Distant neighbor base sequence context effects in human nucleotide excision repair of a benzo[a]pyrene-derived DNA lesion.
    Cai Y, Kropachev K, Xu R, Tang Y, Kolbanovskii M, Kolbanovskii A, Amin S, Patel DJ, Broyde S, Geacintov NE.
    J Mol Biol; 2010 Jun 11; 399(3):397-409. PubMed ID: 20399214
    [Abstract] [Full Text] [Related]

  • 8. Differences in the Access of Lesions to the Nucleotide Excision Repair Machinery in Nucleosomes.
    Cai Y, Kropachev K, Terzidis MA, Masi A, Chatgilialoglu C, Shafirovich V, Geacintov NE, Broyde S.
    Biochemistry; 2015 Jul 14; 54(27):4181-5. PubMed ID: 26091016
    [Abstract] [Full Text] [Related]

  • 9. Resistance to Nucleotide Excision Repair of Bulky Guanine Adducts Opposite Abasic Sites in DNA Duplexes and Relationships between Structure and Function.
    Liu Z, Ding S, Kropachev K, Jia L, Amin S, Broyde S, Geacintov NE.
    PLoS One; 2015 Jul 14; 10(9):e0137124. PubMed ID: 26340000
    [Abstract] [Full Text] [Related]

  • 10. Nucleotide excision repair from site-specifically platinum-modified nucleosomes.
    Wang D, Hara R, Singh G, Sancar A, Lippard SJ.
    Biochemistry; 2003 Jun 10; 42(22):6747-53. PubMed ID: 12779329
    [Abstract] [Full Text] [Related]

  • 11. Resistance of bulky DNA lesions to nucleotide excision repair can result from extensive aromatic lesion-base stacking interactions.
    Reeves DA, Mu H, Kropachev K, Cai Y, Ding S, Kolbanovskiy A, Kolbanovskiy M, Chen Y, Krzeminski J, Amin S, Patel DJ, Broyde S, Geacintov NE.
    Nucleic Acids Res; 2011 Nov 01; 39(20):8752-64. PubMed ID: 21764772
    [Abstract] [Full Text] [Related]

  • 12. The DNA damage-sensing NER repair factor XPC-RAD23B does not recognize bulky DNA lesions with a missing nucleotide opposite the lesion.
    Feher KM, Kolbanovskiy A, Durandin A, Shim Y, Min JH, Lee YC, Shafirovich V, Mu H, Broyde S, Geacintov NE.
    DNA Repair (Amst); 2020 Dec 01; 96():102985. PubMed ID: 33035795
    [Abstract] [Full Text] [Related]

  • 13. Differential nucleotide excision repair susceptibility of bulky DNA adducts in different sequence contexts: hierarchies of recognition signals.
    Cai Y, Patel DJ, Geacintov NE, Broyde S.
    J Mol Biol; 2009 Jan 09; 385(1):30-44. PubMed ID: 18948114
    [Abstract] [Full Text] [Related]

  • 14. The sequence dependence of human nucleotide excision repair efficiencies of benzo[a]pyrene-derived DNA lesions: insights into the structural factors that favor dual incisions.
    Kropachev K, Kolbanovskii M, Cai Y, Rodríguez F, Kolbanovskii A, Liu Y, Zhang L, Amin S, Patel D, Broyde S, Geacintov NE.
    J Mol Biol; 2009 Mar 13; 386(5):1193-203. PubMed ID: 19162041
    [Abstract] [Full Text] [Related]

  • 15. The structural location of DNA lesions in nucleosome core particles determines accessibility by base excision repair enzymes.
    Rodriguez Y, Smerdon MJ.
    J Biol Chem; 2013 May 10; 288(19):13863-75. PubMed ID: 23543741
    [Abstract] [Full Text] [Related]

  • 16. Solution conformation of the (-)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Feng B, Gorin A, Kolbanovskiy A, Hingerty BE, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1997 Nov 11; 36(45):13780-90. PubMed ID: 9374854
    [Abstract] [Full Text] [Related]

  • 17. Nucleotide Excision Repair Lesion-Recognition Protein Rad4 Captures a Pre-Flipped Partner Base in a Benzo[a]pyrene-Derived DNA Lesion: How Structure Impacts the Binding Pathway.
    Mu H, Geacintov NE, Min JH, Zhang Y, Broyde S.
    Chem Res Toxicol; 2017 Jun 19; 30(6):1344-1354. PubMed ID: 28460163
    [Abstract] [Full Text] [Related]

  • 18. Solution conformation of the (+)-cis-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Cosman M, Fiala R, Hingerty BE, Amin S, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1994 Sep 27; 33(38):11518-27. PubMed ID: 7918365
    [Abstract] [Full Text] [Related]

  • 19. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M, Hingerty BE, Luneva N, Amin S, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1996 Jul 30; 35(30):9850-63. PubMed ID: 8703959
    [Abstract] [Full Text] [Related]

  • 20. Origins of conformational differences between cis and trans DNA adducts derived from enantiomeric anti-benzo[a]pyrene diol epoxides.
    Xie XM, Geacintov NE, Broyde S.
    Chem Res Toxicol; 1999 Jul 30; 12(7):597-609. PubMed ID: 10409399
    [Abstract] [Full Text] [Related]

    Page: [Next] [New Search]
    of 15.