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485 related items for PubMed ID: 32019604

  • 1. Nanopore sequencing-based genome assembly and evolutionary genomics of circum-basmati rice.
    Choi JY, Lye ZN, Groen SC, Dai X, Rughani P, Zaaijer S, Harrington ED, Juul S, Purugganan MD.
    Genome Biol; 2020 Feb 05; 21(1):21. PubMed ID: 32019604
    [Abstract] [Full Text] [Related]

  • 2. A chromosome-level genome assembly of the wild rice Oryza rufipogon facilitates tracing the origins of Asian cultivated rice.
    Xie X, Du H, Tang H, Tang J, Tan X, Liu W, Li T, Lin Z, Liang C, Liu YG.
    Sci China Life Sci; 2021 Feb 05; 64(2):282-293. PubMed ID: 32737856
    [Abstract] [Full Text] [Related]

  • 3. Evaluation of Whole-Genome Sequence, Genetic Diversity, and Agronomic Traits of Basmati Rice (Oryza sativa L.).
    Kishor DS, Seo J, Chin JH, Koh HJ.
    Front Genet; 2020 Feb 05; 11():86. PubMed ID: 32153645
    [Abstract] [Full Text] [Related]

  • 4. Origin of the Aromatic Group of Cultivated Rice (Oryza sativa L.) Traced to the Indian Subcontinent.
    Civáň P, Ali S, Batista-Navarro R, Drosou K, Ihejieto C, Chakraborty D, Ray A, Gladieux P, Brown TA.
    Genome Biol Evol; 2019 Mar 01; 11(3):832-843. PubMed ID: 30793171
    [Abstract] [Full Text] [Related]

  • 5. Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63.
    Zhang J, Chen LL, Xing F, Kudrna DA, Yao W, Copetti D, Mu T, Li W, Song JM, Xie W, Lee S, Talag J, Shao L, An Y, Zhang CL, Ouyang Y, Sun S, Jiao WB, Lv F, Du B, Luo M, Maldonado CE, Goicoechea JL, Xiong L, Wu C, Xing Y, Zhou DX, Yu S, Zhao Y, Wang G, Yu Y, Luo Y, Zhou ZW, Hurtado BE, Danowitz A, Wing RA, Zhang Q.
    Proc Natl Acad Sci U S A; 2016 Aug 30; 113(35):E5163-71. PubMed ID: 27535938
    [Abstract] [Full Text] [Related]

  • 6. De novo Genome Assembly of the indica Rice Variety IR64 Using Linked-Read Sequencing and Nanopore Sequencing.
    Tanaka T, Nishijima R, Teramoto S, Kitomi Y, Hayashi T, Uga Y, Kawakatsu T.
    G3 (Bethesda); 2020 May 04; 10(5):1495-1501. PubMed ID: 32184372
    [Abstract] [Full Text] [Related]

  • 7. Genetic analysis of Indian aromatic and quality rice (Oryza sativa L.) germplasm using panels of fluorescently-labeled microsatellite markers.
    Jain S, Jain RK, McCouch SR.
    Theor Appl Genet; 2004 Sep 04; 109(5):965-77. PubMed ID: 15309297
    [Abstract] [Full Text] [Related]

  • 8. Genome sequence of the model rice variety KitaakeX.
    Jain R, Jenkins J, Shu S, Chern M, Martin JA, Copetti D, Duong PQ, Pham NT, Kudrna DA, Talag J, Schackwitz WS, Lipzen AM, Dilworth D, Bauer D, Grimwood J, Nelson CR, Xing F, Xie W, Barry KW, Wing RA, Schmutz J, Li G, Ronald PC.
    BMC Genomics; 2019 Nov 27; 20(1):905. PubMed ID: 31775618
    [Abstract] [Full Text] [Related]

  • 9. High-quality genome assembly of Huazhan and Tianfeng, the parents of an elite rice hybrid Tian-you-hua-zhan.
    Zhang H, Wang Y, Deng C, Zhao S, Zhang P, Feng J, Huang W, Kang S, Qian Q, Xiong G, Chang Y.
    Sci China Life Sci; 2022 Feb 27; 65(2):398-411. PubMed ID: 34251582
    [Abstract] [Full Text] [Related]

  • 10. Relationships between Iraqi Rice Varieties at the Nuclear and Plastid Genome Levels.
    Badro H, Furtado A, Henry R.
    Plants (Basel); 2019 Nov 07; 8(11):. PubMed ID: 31703353
    [Abstract] [Full Text] [Related]

  • 11. Role of genetic introgression during the evolution of cultivated rice (Oryza sativa L.).
    Civáň P, Brown TA.
    BMC Evol Biol; 2018 Apr 23; 18(1):57. PubMed ID: 29688851
    [Abstract] [Full Text] [Related]

  • 12. Sequencing and de novo assembly of a near complete indica rice genome.
    Du H, Yu Y, Ma Y, Gao Q, Cao Y, Chen Z, Ma B, Qi M, Li Y, Zhao X, Wang J, Liu K, Qin P, Yang X, Zhu L, Li S, Liang C.
    Nat Commun; 2017 May 04; 8():15324. PubMed ID: 28469237
    [Abstract] [Full Text] [Related]

  • 13. Multi-omics resources for targeted agronomic improvement of pigmented rice.
    Sedeek K, Zuccolo A, Fornasiero A, Weber AM, Sanikommu K, Sampathkumar S, Rivera LF, Butt H, Mussurova S, Alhabsi A, Nurmansyah N, Ryan EP, Wing RA, Mahfouz MM.
    Nat Food; 2023 May 04; 4(5):366-371. PubMed ID: 37169820
    [Abstract] [Full Text] [Related]

  • 14. A map of rice genome variation reveals the origin of cultivated rice.
    Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B.
    Nature; 2012 Oct 25; 490(7421):497-501. PubMed ID: 23034647
    [Abstract] [Full Text] [Related]

  • 15. Chloroplast phylogeography of AA genome rice species.
    Moner AM, Furtado A, Henry RJ.
    Mol Phylogenet Evol; 2018 Oct 25; 127():475-487. PubMed ID: 29753711
    [Abstract] [Full Text] [Related]

  • 16. Genic non-coding microsatellites in the rice genome: characterization, marker design and use in assessing genetic and evolutionary relationships among domesticated groups.
    Parida SK, Dalal V, Singh AK, Singh NK, Mohapatra T.
    BMC Genomics; 2009 Mar 31; 10():140. PubMed ID: 19335879
    [Abstract] [Full Text] [Related]

  • 17. Fine Scale Genomic Signals of Admixture and Alien Introgression among Asian Rice Landraces.
    Santos JD, Chebotarov D, McNally KL, Bartholomé J, Droc G, Billot C, Glaszmann JC.
    Genome Biol Evol; 2019 May 01; 11(5):1358-1373. PubMed ID: 31002105
    [Abstract] [Full Text] [Related]

  • 18. Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice.
    Zhao Q, Feng Q, Lu H, Li Y, Wang A, Tian Q, Zhan Q, Lu Y, Zhang L, Huang T, Wang Y, Fan D, Zhao Y, Wang Z, Zhou C, Chen J, Zhu C, Li W, Weng Q, Xu Q, Wang ZX, Wei X, Han B, Huang X.
    Nat Genet; 2018 Feb 01; 50(2):278-284. PubMed ID: 29335547
    [Abstract] [Full Text] [Related]

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  • 20. Evolutionary Genomics of Structural Variation in Asian Rice (Oryza sativa) Domestication.
    Kou Y, Liao Y, Toivainen T, Lv Y, Tian X, Emerson JJ, Gaut BS, Zhou Y.
    Mol Biol Evol; 2020 Dec 16; 37(12):3507-3524. PubMed ID: 32681796
    [Abstract] [Full Text] [Related]

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