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Journal Abstract Search

365 related items for PubMed ID: 32093654

  • 1. Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes.
    Treiber ML, Taft DH, Korf I, Mills DA, Lemay DG.
    BMC Bioinformatics; 2020 Feb 24; 21(1):74. PubMed ID: 32093654
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  • 2. Joining Illumina paired-end reads for classifying phylogenetic marker sequences.
    Liu T, Chen CY, Chen-Deng A, Chen YL, Wang JY, Hou YI, Lin MC.
    BMC Bioinformatics; 2020 Mar 14; 21(1):105. PubMed ID: 32171248
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  • 3. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL, Watson M, Minot SS, Rivera MC, Franklin RB.
    Gigascience; 2017 Mar 01; 6(3):1-10. PubMed ID: 28327976
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  • 4. A comprehensive investigation of metagenome assembly by linked-read sequencing.
    Zhang L, Fang X, Liao H, Zhang Z, Zhou X, Han L, Chen Y, Qiu Q, Li SC.
    Microbiome; 2020 Nov 11; 8(1):156. PubMed ID: 33176883
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  • 6. Assembly and Annotation of Viral Metagenomes from Short-Read Sequencing Data.
    Mangalea MR, Keift K, Duerkop BA, Anantharaman K.
    Methods Mol Biol; 2023 Nov 11; 2649():317-337. PubMed ID: 37258871
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  • 9. Dancing the Nanopore limbo - Nanopore metagenomics from small DNA quantities for bacterial genome reconstruction.
    Simon SA, Schmidt K, Griesdorn L, Soares AR, Bornemann TLV, Probst AJ.
    BMC Genomics; 2023 Dec 01; 24(1):727. PubMed ID: 38041056
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  • 10. Species classifier choice is a key consideration when analysing low-complexity food microbiome data.
    Walsh AM, Crispie F, O'Sullivan O, Finnegan L, Claesson MJ, Cotter PD.
    Microbiome; 2018 Mar 20; 6(1):50. PubMed ID: 29554948
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  • 14. Improving the sensitivity of long read overlap detection using grouped short k-mer matches.
    Du N, Chen J, Sun Y.
    BMC Genomics; 2019 Apr 04; 20(Suppl 2):190. PubMed ID: 30967123
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  • 15. PEAR: a fast and accurate Illumina Paired-End reAd mergeR.
    Zhang J, Kobert K, Flouri T, Stamatakis A.
    Bioinformatics; 2014 Mar 01; 30(5):614-20. PubMed ID: 24142950
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  • 18. Fast and simple protein-alignment-guided assembly of orthologous gene families from microbiome sequencing reads.
    Huson DH, Tappu R, Bazinet AL, Xie C, Cummings MP, Nieselt K, Williams R.
    Microbiome; 2017 Jan 25; 5(1):11. PubMed ID: 28122610
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