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Journal Abstract Search

190 related items for PubMed ID: 32382536

  • 1. A Comparison of Two DNA Metagenomic Bioinformatic Pipelines While Evaluating the Microbial Diversity in Feces of Tanzanian Small Holder Dairy Cattle.
    Kibegwa FM, Bett RC, Gachuiri CK, Stomeo F, Mujibi FD.
    Biomed Res Int; 2020; 2020():2348560. PubMed ID: 32382536
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  • 3. Taxonomic annotation of 16S rRNA sequences of pig intestinal samples using MG-RAST and QIIME2 generated different microbiota compositions.
    Lima J, Manning T, Rutherford KM, Baima ET, Dewhurst RJ, Walsh P, Roehe R.
    J Microbiol Methods; 2021 Jul; 186():106235. PubMed ID: 33974954
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  • 4. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL, Watson M, Minot SS, Rivera MC, Franklin RB.
    Gigascience; 2017 Mar 01; 6(3):1-10. PubMed ID: 28327976
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  • 7. Ultrafast and accurate 16S rRNA microbial community analysis using Kraken 2.
    Lu J, Salzberg SL.
    Microbiome; 2020 Aug 28; 8(1):124. PubMed ID: 32859275
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  • 8. Kraken: ultrafast metagenomic sequence classification using exact alignments.
    Wood DE, Salzberg SL.
    Genome Biol; 2014 Mar 03; 15(3):R46. PubMed ID: 24580807
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  • 13. Studying long 16S rDNA sequences with ultrafast-metagenomic sequence classification using exact alignments (Kraken).
    Valenzuela-González F, Martínez-Porchas M, Villalpando-Canchola E, Vargas-Albores F.
    J Microbiol Methods; 2016 Mar 03; 122():38-42. PubMed ID: 26812576
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  • 18. Assessment of short-read shotgun sequencing and microbiome analysis of faecal samples to discriminate between equol producers and non-producers.
    Vázquez L, Cabrera-Rubio R, Tamames J, Mayo B, Flórez AB.
    Benef Microbes; 2023 Feb 01; 14(3):255-268. PubMed ID: 37078124
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  • 19. A microbiome reality check: limitations of in silico-based metagenomic approaches to study complex bacterial communities.
    Lugli GA, Milani C, Mancabelli L, Turroni F, van Sinderen D, Ventura M.
    Environ Microbiol Rep; 2019 Dec 01; 11(6):840-847. PubMed ID: 31668006
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  • 20. UltraSEQ, a Universal Bioinformatic Platform for Information-Based Clinical Metagenomics and Beyond.
    Gemler BT, Mukherjee C, Howland C, Fullerton PA, Spurbeck RR, Catlin LA, Smith A, Minard-Smith AT, Bartling C.
    Microbiol Spectr; 2023 Jun 15; 11(3):e0416022. PubMed ID: 37039637
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