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Journal Abstract Search

595 related items for PubMed ID: 32462738

  • 1. Comparing diversity levels in environmental samples: DNA sequence capture and metabarcoding approaches using 18S and COI genes.
    Giebner H, Langen K, Bourlat SJ, Kukowka S, Mayer C, Astrin JJ, Misof B, Fonseca VG.
    Mol Ecol Resour; 2020 Sep; 20(5):1333-1345. PubMed ID: 32462738
    [Abstract] [Full Text] [Related]

  • 2. Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding.
    Brandt MI, Trouche B, Quintric L, Günther B, Wincker P, Poulain J, Arnaud-Haond S.
    Mol Ecol Resour; 2021 Aug; 21(6):1904-1921. PubMed ID: 33835712
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  • 3. Capturing open ocean biodiversity: Comparing environmental DNA metabarcoding to the continuous plankton recorder.
    Suter L, Polanowski AM, Clarke LJ, Kitchener JA, Deagle BE.
    Mol Ecol; 2021 Jul; 30(13):3140-3157. PubMed ID: 32767849
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  • 5. Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity.
    Jamy M, Foster R, Barbera P, Czech L, Kozlov A, Stamatakis A, Bending G, Hilton S, Bass D, Burki F.
    Mol Ecol Resour; 2020 Mar; 20(2):429-443. PubMed ID: 31705734
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  • 6. Effects of sampling effort on biodiversity patterns estimated from environmental DNA metabarcoding surveys.
    Grey EK, Bernatchez L, Cassey P, Deiner K, Deveney M, Howland KL, Lacoursière-Roussel A, Leong SCY, Li Y, Olds B, Pfrender ME, Prowse TAA, Renshaw MA, Lodge DM.
    Sci Rep; 2018 Jun 11; 8(1):8843. PubMed ID: 29891968
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  • 7. Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass--Sequence Relationships with an Innovative Metabarcoding Protocol.
    Elbrecht V, Leese F.
    PLoS One; 2015 Jun 11; 10(7):e0130324. PubMed ID: 26154168
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  • 8. DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers.
    Wangensteen OS, Palacín C, Guardiola M, Turon X.
    PeerJ; 2018 Jun 11; 6():e4705. PubMed ID: 29740514
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  • 10. The widely used small subunit 18S rDNA molecule greatly underestimates true diversity in biodiversity surveys of the meiofauna.
    Tang CQ, Leasi F, Obertegger U, Kieneke A, Barraclough TG, Fontaneto D.
    Proc Natl Acad Sci U S A; 2012 Oct 02; 109(40):16208-12. PubMed ID: 22988084
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  • 12. Assessing eukaryotic biodiversity in the Florida Keys National Marine Sanctuary through environmental DNA metabarcoding.
    Sawaya NA, Djurhuus A, Closek CJ, Hepner M, Olesin E, Visser L, Kelble C, Hubbard K, Breitbart M.
    Ecol Evol; 2019 Feb 02; 9(3):1029-1040. PubMed ID: 30805138
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  • 15. Multi-marker DNA metabarcoding reflects tardigrade diversity in different habitats.
    Topstad L, Guidetti R, Majaneva M, Ekrem T.
    Genome; 2021 Mar 02; 64(3):217-231. PubMed ID: 33141617
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  • 16. PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S ribosomal RNA, ITS, and COI marker genes.
    Zafeiropoulos H, Viet HQ, Vasileiadou K, Potirakis A, Arvanitidis C, Topalis P, Pavloudi C, Pafilis E.
    Gigascience; 2020 Mar 01; 9(3):. PubMed ID: 32161947
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  • 17. The dilemma of underestimating freshwater biodiversity: morphological and molecular approaches.
    Schoenle A, Scepanski D, Floß A, Büchel P, Koblitz AK, Scherwaß A, Arndt H, Waldvogel AM.
    BMC Ecol Evol; 2024 May 27; 24(1):69. PubMed ID: 38802764
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  • 19. Environmental DNA (eDNA) metabarcoding reveals strong discrimination among diverse marine habitats connected by water movement.
    Jeunen GJ, Knapp M, Spencer HG, Lamare MD, Taylor HR, Stat M, Bunce M, Gemmell NJ.
    Mol Ecol Resour; 2019 Mar 27; 19(2):426-438. PubMed ID: 30576077
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  • 20. Haptophyte Diversity and Vertical Distribution Explored by 18S and 28S Ribosomal RNA Gene Metabarcoding and Scanning Electron Microscopy.
    Gran-Stadniczeñko S, Šupraha L, Egge ED, Edvardsen B.
    J Eukaryot Microbiol; 2017 Jul 27; 64(4):514-532. PubMed ID: 27973742
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