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Journal Abstract Search

269 related items for PubMed ID: 33214333

  • 1. Posttranscriptional modifications at the 37th position in the anticodon stem-loop of tRNA: structural insights from MD simulations.
    Seelam Prabhakar P, Takyi NA, Wetmore SD.
    RNA; 2021 Feb; 27(2):202-220. PubMed ID: 33214333
    [Abstract] [Full Text] [Related]

  • 2. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 3. Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.
    Stuart JW, Gdaniec Z, Guenther R, Marszalek M, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13396-404. PubMed ID: 11063577
    [Abstract] [Full Text] [Related]

  • 4. Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.
    Durant PC, Bajji AC, Sundaram M, Kumar RK, Davis DR.
    Biochemistry; 2005 Jun 07; 44(22):8078-89. PubMed ID: 15924427
    [Abstract] [Full Text] [Related]

  • 5. An RNA complex of the HIV-1 A-loop and tRNA(Lys,3) is stabilized by nucleoside modifications.
    Bajji AC, Sundaram M, Myszka DG, Davis DR.
    J Am Chem Soc; 2002 Dec 04; 124(48):14302-3. PubMed ID: 12452693
    [Abstract] [Full Text] [Related]

  • 6. Conformational preferences and structural analysis of hypermodified nucleoside, peroxywybutosine (o2yW) found at 37th position in anticodon loop of tRNAPhe and its role in modulating UUC codon-anticodon interactions.
    Fandilolu PM, Kamble AS, Sambhare SB, Sonawane KD.
    Gene; 2018 Jan 30; 641():310-325. PubMed ID: 29107006
    [Abstract] [Full Text] [Related]

  • 7. Solution structure of psi32-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Nikonowicz EP.
    Nucleic Acids Res; 2005 Jan 30; 33(22):6961-71. PubMed ID: 16377777
    [Abstract] [Full Text] [Related]

  • 8. Metal ion stabilization of the U-turn of the A37 N6-dimethylallyl-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Tworowska I, Nikonowicz EP.
    Biochemistry; 2004 Jan 13; 43(1):55-66. PubMed ID: 14705931
    [Abstract] [Full Text] [Related]

  • 9. Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.
    Sundaram M, Durant PC, Davis DR.
    Biochemistry; 2000 Oct 17; 39(41):12575-84. PubMed ID: 11027137
    [Abstract] [Full Text] [Related]

  • 10. Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide.
    Mucha P, Szyk A, Rekowski P, Weiss PA, Agris PF.
    Biochemistry; 2001 Nov 27; 40(47):14191-9. PubMed ID: 11714272
    [Abstract] [Full Text] [Related]

  • 11. Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.
    Yarian C, Marszalek M, Sochacka E, Malkiewicz A, Guenther R, Miskiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13390-5. PubMed ID: 11063576
    [Abstract] [Full Text] [Related]

  • 12. The role of modifications in codon discrimination by tRNA(Lys)UUU.
    Murphy FV, Ramakrishnan V, Malkiewicz A, Agris PF.
    Nat Struct Mol Biol; 2004 Dec 07; 11(12):1186-91. PubMed ID: 15558052
    [Abstract] [Full Text] [Related]

  • 13. Naturally-occurring modification restricts the anticodon domain conformational space of tRNA(Phe).
    Stuart JW, Koshlap KM, Guenther R, Agris PF.
    J Mol Biol; 2003 Dec 12; 334(5):901-18. PubMed ID: 14643656
    [Abstract] [Full Text] [Related]

  • 14. Structural significance of hypermodified nucleic acid base hydroxywybutine (OHyW) which occur at 37th position in the anticodon loop of yeast tRNA(Phe).
    Kumbhar NM, Kumbhar BV, Sonawane KD.
    J Mol Graph Model; 2012 Sep 12; 38():174-85. PubMed ID: 23073221
    [Abstract] [Full Text] [Related]

  • 15. Base pairing within the psi32,psi39-modified anticodon arm of Escherichia coli tRNA(Phe).
    Tworowska I, Nikonowicz EP.
    J Am Chem Soc; 2006 Dec 13; 128(49):15570-1. PubMed ID: 17147349
    [Abstract] [Full Text] [Related]

  • 16. Aminoacyl-tRNA synthetase and U54 methyltransferase recognize conformations of the yeast tRNA(Phe) anticodon and T stem/loop domain.
    Guenther RH, Bakal RS, Forrest B, Chen Y, Sengupta R, Nawrot B, Sochacka E, Jankowska J, Kraszewski A, Malkiewicz A.
    Biochimie; 1994 Dec 13; 76(12):1143-51. PubMed ID: 7748949
    [Abstract] [Full Text] [Related]

  • 17. Synthesis of the tRNA(Lys,3) anticodon stem-loop domain containing the hypermodified ms2t6A nucleoside.
    Bajji AC, Davis DR.
    J Org Chem; 2002 Jul 26; 67(15):5352-8. PubMed ID: 12126427
    [Abstract] [Full Text] [Related]

  • 18. Universally conserved interactions between the ribosome and the anticodon stem-loop of A site tRNA important for translocation.
    Phelps SS, Jerinic O, Joseph S.
    Mol Cell; 2002 Oct 26; 10(4):799-807. PubMed ID: 12419224
    [Abstract] [Full Text] [Related]

  • 19. Modifications of the human tRNA anticodon loop and their associations with genetic diseases.
    Zhou JB, Wang ED, Zhou XL.
    Cell Mol Life Sci; 2021 Dec 26; 78(23):7087-7105. PubMed ID: 34605973
    [Abstract] [Full Text] [Related]

  • 20. The crystal structure of HIV reverse-transcription primer tRNA(Lys,3) shows a canonical anticodon loop.
    Bénas P, Bec G, Keith G, Marquet R, Ehresmann C, Ehresmann B, Dumas P.
    RNA; 2000 Oct 26; 6(10):1347-55. PubMed ID: 11073212
    [Abstract] [Full Text] [Related]

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