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269 related items for PubMed ID: 33214333

  • 21. Synthesis and characterization of the native anticodon domain of E. coli TRNA(Lys): simultaneous incorporation of modified nucleosides mnm(5)s(2)U, t(6)A, and pseudouridine using phosphoramidite chemistry.
    Sundaram M, Crain PF, Davis DR.
    J Org Chem; 2000 Sep 08; 65(18):5609-14. PubMed ID: 10970299
    [Abstract] [Full Text] [Related]

  • 22. The influence of hypermodified nucleosides lysidine and t(6)A to recognize the AUA codon instead of AUG: a molecular dynamics simulation study.
    Sonawane KD, Sambhare SB.
    Integr Biol (Camb); 2015 Nov 08; 7(11):1387-95. PubMed ID: 26215455
    [Abstract] [Full Text] [Related]

  • 23. Transfer RNA recognition by the Escherichia coli delta2-isopentenyl-pyrophosphate:tRNA delta2-isopentenyl transferase: dependence on the anticodon arm structure.
    Motorin Y, Bec G, Tewari R, Grosjean H.
    RNA; 1997 Jul 08; 3(7):721-33. PubMed ID: 9214656
    [Abstract] [Full Text] [Related]

  • 24. Role of modified nucleosides of yeast tRNA(Phe) in ribosomal binding.
    Ashraf SS, Guenther RH, Ansari G, Malkiewicz A, Sochacka E, Agris PF.
    Cell Biochem Biophys; 2000 Jul 08; 33(3):241-52. PubMed ID: 11325044
    [Abstract] [Full Text] [Related]

  • 25. The naturally occurring N6-threonyl adenine in anticodon loop of Schizosaccharomyces pombe tRNAi causes formation of a unique U-turn motif.
    Lescrinier E, Nauwelaerts K, Zanier K, Poesen K, Sattler M, Herdewijn P.
    Nucleic Acids Res; 2006 Jul 08; 34(10):2878-86. PubMed ID: 16738127
    [Abstract] [Full Text] [Related]

  • 26. The effect of pseudouridine and pH on the structure and dynamics of the anticodon stem-loop of tRNA(Lys,3).
    Durant PC, Davis DR.
    Nucleic Acids Symp Ser; 1997 Jul 08; (36):56-7. PubMed ID: 9478205
    [Abstract] [Full Text] [Related]

  • 27. Yeast Trm7 interacts with distinct proteins for critical modifications of the tRNAPhe anticodon loop.
    Guy MP, Podyma BM, Preston MA, Shaheen HH, Krivos KL, Limbach PA, Hopper AK, Phizicky EM.
    RNA; 2012 Oct 08; 18(10):1921-33. PubMed ID: 22912484
    [Abstract] [Full Text] [Related]

  • 28. Molecular dynamics simulations of human tRNA Lys,3 UUU: the role of modified bases in mRNA recognition.
    McCrate NE, Varner ME, Kim KI, Nagan MC.
    Nucleic Acids Res; 2006 Oct 08; 34(19):5361-8. PubMed ID: 17012271
    [Abstract] [Full Text] [Related]

  • 29. S. cerevisiae Trm140 has two recognition modes for 3-methylcytidine modification of the anticodon loop of tRNA substrates.
    Han L, Marcus E, D'Silva S, Phizicky EM.
    RNA; 2017 Mar 08; 23(3):406-419. PubMed ID: 28003514
    [Abstract] [Full Text] [Related]

  • 30. Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".
    Dao V, Guenther R, Malkiewicz A, Nawrot B, Sochacka E, Kraszewski A, Jankowska J, Everett K, Agris PF.
    Proc Natl Acad Sci U S A; 1994 Mar 15; 91(6):2125-9. PubMed ID: 7510886
    [Abstract] [Full Text] [Related]

  • 31. Human tRNA(Lys3)(UUU) is pre-structured by natural modifications for cognate and wobble codon binding through keto-enol tautomerism.
    Vendeix FA, Murphy FV, Cantara WA, Leszczyńska G, Gustilo EM, Sproat B, Malkiewicz A, Agris PF.
    J Mol Biol; 2012 Mar 02; 416(4):467-85. PubMed ID: 22227389
    [Abstract] [Full Text] [Related]

  • 32. 5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.
    Chen Y, Sierzputowska-Gracz H, Guenther R, Everett K, Agris PF.
    Biochemistry; 1993 Sep 28; 32(38):10249-53. PubMed ID: 8399153
    [Abstract] [Full Text] [Related]

  • 33. Importance of a tRNA anticodon loop modification and a conserved, noncanonical anticodon stem pairing in tRNACGGProfor decoding.
    Nguyen HA, Hoffer ED, Dunham CM.
    J Biol Chem; 2019 Apr 05; 294(14):5281-5291. PubMed ID: 30782843
    [Abstract] [Full Text] [Related]

  • 34. Presence of the hypermodified nucleotide N6-(delta 2-isopentenyl)-2-methylthioadenosine prevents codon misreading by Escherichia coli phenylalanyl-transfer RNA.
    Wilson RK, Roe BA.
    Proc Natl Acad Sci U S A; 1989 Jan 05; 86(2):409-13. PubMed ID: 2643111
    [Abstract] [Full Text] [Related]

  • 35. Unconventional structure of tRNA(Lys)SUU anticodon explains tRNA's role in bacterial and mammalian ribosomal frameshifting and primer selection by HIV-1.
    Agris PF, Guenther R, Ingram PC, Basti MM, Stuart JW, Sochacka E, Malkiewicz A.
    RNA; 1997 Apr 05; 3(4):420-8. PubMed ID: 9085848
    [Abstract] [Full Text] [Related]

  • 36. Structural features of tRNALys favored by anticodon nuclease as inferred from reactivities of anticodon stem and loop substrate analogs.
    Jiang Y, Blanga S, Amitsur M, Meidler R, Krivosheyev E, Sundaram M, Bajji AC, Davis DR, Kaufmann G.
    J Biol Chem; 2002 Feb 08; 277(6):3836-41. PubMed ID: 11723135
    [Abstract] [Full Text] [Related]

  • 37. Preferences of AAA/AAG codon recognition by modified nucleosides, τm5s2U34 and t6A37 present in tRNALys.
    Sonawane KD, Kamble AS, Fandilolu PM.
    J Biomol Struct Dyn; 2018 Dec 08; 36(16):4182-4196. PubMed ID: 29243556
    [Abstract] [Full Text] [Related]

  • 38. The chemical synthesis of E. coli tRNA(Lys) anticodon loop fragment and its analogues.
    Sochacka E.
    Nucleosides Nucleotides; 1998 Dec 08; 17(1-3):327-38. PubMed ID: 9708353
    [Abstract] [Full Text] [Related]

  • 39. Identification of 2'-hydroxyl groups required for interaction of a tRNA anticodon stem-loop region with the ribosome.
    von Ahsen U, Green R, Schroeder R, Noller HF.
    RNA; 1997 Jan 08; 3(1):49-56. PubMed ID: 8990398
    [Abstract] [Full Text] [Related]

  • 40. Modifications modulate anticodon loop dynamics and codon recognition of E. coli tRNA(Arg1,2).
    Cantara WA, Bilbille Y, Kim J, Kaiser R, Leszczyńska G, Malkiewicz A, Agris PF.
    J Mol Biol; 2012 Mar 02; 416(4):579-97. PubMed ID: 22240457
    [Abstract] [Full Text] [Related]

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