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Journal Abstract Search

224 related items for PubMed ID: 33284634

  • 1. Tailoring to Search Engines: Bottom-Up Proteomics with Collision Energies Optimized for Identification Confidence.
    Révész Á, Milley MG, Nagy K, Szabó D, Kalló G, Csősz É, Vékey K, Drahos L.
    J Proteome Res; 2021 Jan 01; 20(1):474-484. PubMed ID: 33284634
    [Abstract] [Full Text] [Related]

  • 2. Collision energies on QTof and Orbitrap instruments: How to make proteomics measurements comparable?
    Szabó D, Schlosser G, Vékey K, Drahos L, Révész Á.
    J Mass Spectrom; 2021 Jan 01; 56(1):e4693. PubMed ID: 33277714
    [Abstract] [Full Text] [Related]

  • 3. Selection of Collision Energies in Proteomics Mass Spectrometry Experiments for Best Peptide Identification: Study of Mascot Score Energy Dependence Reveals Double Optimum.
    Révész Á, Rokob TA, Jeanne Dit Fouque D, Turiák L, Memboeuf A, Vékey K, Drahos L.
    J Proteome Res; 2018 May 04; 17(5):1898-1906. PubMed ID: 29607649
    [Abstract] [Full Text] [Related]

  • 4. Can We Boost N-Glycopeptide Identification Confidence? Smart Collision Energy Choice Taking into Account Structure and Search Engine.
    Hevér H, Xue A, Nagy K, Komka K, Vékey K, Drahos L, Révész Á.
    J Am Soc Mass Spectrom; 2024 Feb 07; 35(2):333-343. PubMed ID: 38286027
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  • 5. Diversity Matters: Optimal Collision Energies for Tandem Mass Spectrometric Analysis of a Large Set of N-Glycopeptides.
    Hevér H, Nagy K, Xue A, Sugár S, Komka K, Vékey K, Drahos L, Révész Á.
    J Proteome Res; 2022 Nov 04; 21(11):2743-2753. PubMed ID: 36201757
    [Abstract] [Full Text] [Related]

  • 6. Optimum collision energies for proteomics: The impact of ion mobility separation.
    Nagy K, Gellén G, Papp D, Schlosser G, Révész Á.
    J Mass Spectrom; 2023 Sep 04; 58(9):e4957. PubMed ID: 37415399
    [Abstract] [Full Text] [Related]

  • 7. High-throughput database search and large-scale negative polarity liquid chromatography-tandem mass spectrometry with ultraviolet photodissociation for complex proteomic samples.
    Madsen JA, Xu H, Robinson MR, Horton AP, Shaw JB, Giles DK, Kaoud TS, Dalby KN, Trent MS, Brodbelt JS.
    Mol Cell Proteomics; 2013 Sep 04; 12(9):2604-14. PubMed ID: 23695934
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  • 12. Optimal Collision Energies and Bioinformatics Tools for Efficient Bottom-up Sequence Validation of Monoclonal Antibodies.
    Révész Á, Rokob TA, Jeanne Dit Fouque D, Hüse D, Háda V, Turiák L, Memboeuf A, Vékey K, Drahos L.
    Anal Chem; 2019 Oct 15; 91(20):13128-13135. PubMed ID: 31518108
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  • 13. Bolt: a New Age Peptide Search Engine for Comprehensive MS/MS Sequencing Through Vast Protein Databases in Minutes.
    Prakash A, Ahmad S, Majumder S, Jenkins C, Orsburn B.
    J Am Soc Mass Spectrom; 2019 Nov 15; 30(11):2408-2418. PubMed ID: 31452088
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  • 14. A Tandem Mass Spectrometry Sequence Database Search Method for Identification of O-Fucosylated Proteins by Mass Spectrometry.
    Swearingen KE, Eng JK, Shteynberg D, Vigdorovich V, Springer TA, Mendoza L, Sather DN, Deutsch EW, Kappe SHI, Moritz RL.
    J Proteome Res; 2019 Feb 01; 18(2):652-663. PubMed ID: 30523691
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  • 17. Crescendo: A Protein Sequence Database Search Engine for Tandem Mass Spectra.
    Wang J, Zhang Y, Yu Y.
    J Am Soc Mass Spectrom; 2015 Jul 01; 26(7):1077-84. PubMed ID: 25895889
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  • 18. FPTMS: Frequency-based approach to identify the peptide from the low-energy collision-induced dissociation tandem mass spectra.
    Ramachandran S, Thomas T.
    J Proteomics; 2021 Mar 20; 235():104116. PubMed ID: 33453436
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  • 20. Protein-Level Integration Strategy of Multiengine MS Spectra Search Results for Higher Confidence and Sequence Coverage.
    Zhao P, Zhong J, Liu W, Zhao J, Zhang G.
    J Proteome Res; 2017 Dec 01; 16(12):4446-4454. PubMed ID: 28965417
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