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Journal Abstract Search

162 related items for PubMed ID: 33693395

  • 1. The ADC API: A Web API for the Programmatic Query of the AIRR Data Commons.
    Christley S, Aguiar A, Blanck G, Breden F, Bukhari SAC, Busse CE, Jaglale J, Harikrishnan SL, Laserson U, Peters B, Rocha A, Schramm CA, Taylor S, Vander Heiden JA, Zimonja B, Watson CT, Corrie B, Cowell LG.
    Front Big Data; 2020; 3():22. PubMed ID: 33693395
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  • 5. AIRR Community Standardized Representations for Annotated Immune Repertoires.
    Vander Heiden JA, Marquez S, Marthandan N, Bukhari SAC, Busse CE, Corrie B, Hershberg U, Kleinstein SH, Matsen Iv FA, Ralph DK, Rosenfeld AM, Schramm CA, AIRR Community, Christley S, Laserson U.
    Front Immunol; 2018; 9():2206. PubMed ID: 30323809
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  • 11. Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data.
    Breden F, Luning Prak ET, Peters B, Rubelt F, Schramm CA, Busse CE, Vander Heiden JA, Christley S, Bukhari SAC, Thorogood A, Matsen Iv FA, Wine Y, Laserson U, Klatzmann D, Douek DC, Lefranc MP, Collins AM, Bubela T, Kleinstein SH, Watson CT, Cowell LG, Scott JK, Kepler TB.
    Front Immunol; 2017; 8():1418. PubMed ID: 29163494
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  • 12. AIRR-C IG Reference Sets: curated sets of immunoglobulin heavy and light chain germline genes.
    Collins AM, Ohlin M, Corcoran M, Heather JM, Ralph D, Law M, Martínez-Barnetche J, Ye J, Richardson E, Gibson WS, Rodriguez OL, Peres A, Yaari G, Watson CT, Lees WD.
    Front Immunol; 2023; 14():1330153. PubMed ID: 38406579
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  • 13. AIRR community curation and standardised representation for immunoglobulin and T cell receptor germline sets.
    Lees WD, Christley S, Peres A, Kos JT, Corrie B, Ralph D, Breden F, Cowell LG, Yaari G, Corcoran M, Karlsson Hedestam GB, Ohlin M, Collins AM, Watson CT, Busse CE, AIRR Community.
    Immunoinformatics (Amst); 2023 Jun; 10():. PubMed ID: 37388275
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  • 14. nf-core/airrflow: an adaptive immune receptor repertoire analysis workflow employing the Immcantation framework.
    Gabernet G, Marquez S, Bjornson R, Peltzer A, Meng H, Aron E, Lee NY, Jensen C, Ladd D, Hanssen F, Heumos S, nf-core community, Yaari G, Kowarik MC, Nahnsen S, Kleinstein SH.
    bioRxiv; 2024 Jan 28. PubMed ID: 38293151
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  • 15. QL4MDR: a GraphQL query language for ISO 11179-based metadata repositories.
    Ulrich H, Kern J, Tas D, Kock-Schoppenhauer AK, Ückert F, Ingenerf J, Lablans M.
    BMC Med Inform Decis Mak; 2019 Mar 18; 19(1):45. PubMed ID: 30885183
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  • 16. Computational Strategies for Dissecting the High-Dimensional Complexity of Adaptive Immune Repertoires.
    Miho E, Yermanos A, Weber CR, Berger CT, Reddy ST, Greiff V.
    Front Immunol; 2018 Mar 18; 9():224. PubMed ID: 29515569
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  • 17. OGRDB: a reference database of inferred immune receptor genes.
    Lees W, Busse CE, Corcoran M, Ohlin M, Scheepers C, Matsen FA, Yaari G, Watson CT, AIRR Community, Collins A, Shepherd AJ.
    Nucleic Acids Res; 2020 Jan 08; 48(D1):D964-D970. PubMed ID: 31566225
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  • 18. Developing Cancer Informatics Applications and Tools Using the NCI Genomic Data Commons API.
    Wilson S, Fitzsimons M, Ferguson M, Heath A, Jensen M, Miller J, Murphy MW, Porter J, Sahni H, Staudt L, Tang Y, Wang Z, Yu C, Zhang J, Ferretti V, Grossman RL, GDC Project.
    Cancer Res; 2017 Nov 01; 77(21):e15-e18. PubMed ID: 29092930
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  • 19. Antigen discovery tools for adaptive immune receptor repertoire research.
    Bousbaine D, Ploegh HL.
    Curr Opin Syst Biol; 2020 Dec 01; 24():64-70. PubMed ID: 33195881
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  • 20. ISA API: An open platform for interoperable life science experimental metadata.
    Johnson D, Batista D, Cochrane K, Davey RP, Etuk A, Gonzalez-Beltran A, Haug K, Izzo M, Larralde M, Lawson TN, Minotto A, Moreno P, Nainala VC, O'Donovan C, Pireddu L, Roger P, Shaw F, Steinbeck C, Weber RJM, Sansone SA, Rocca-Serra P.
    Gigascience; 2021 Sep 16; 10(9):. PubMed ID: 34528664
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