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177 related items for PubMed ID: 33779761

  • 1. Maize decrease in DNA methylation 1 targets RNA-directed DNA methylation on active chromatin.
    Long J, Liu J, Xia A, Springer NM, He Y.
    Plant Cell; 2021 Aug 13; 33(7):2183-2196. PubMed ID: 33779761
    [Abstract] [Full Text] [Related]

  • 2. Decrease in DNA methylation 1 (DDM1) is required for the formation of m CHH islands in maize.
    Long JC, Xia AA, Liu JH, Jing JL, Wang YZ, Qi CY, He Y.
    J Integr Plant Biol; 2019 Jun 13; 61(6):749-764. PubMed ID: 30387549
    [Abstract] [Full Text] [Related]

  • 3. Loss of RNA-Directed DNA Methylation in Maize Chromomethylase and DDM1-Type Nucleosome Remodeler Mutants.
    Fu FF, Dawe RK, Gent JI.
    Plant Cell; 2018 Jul 13; 30(7):1617-1627. PubMed ID: 29884624
    [Abstract] [Full Text] [Related]

  • 4. RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome.
    Li Q, Gent JI, Zynda G, Song J, Makarevitch I, Hirsch CD, Hirsch CN, Dawe RK, Madzima TF, McGinnis KM, Lisch D, Schmitz RJ, Vaughn MW, Springer NM.
    Proc Natl Acad Sci U S A; 2015 Nov 24; 112(47):14728-33. PubMed ID: 26553984
    [Abstract] [Full Text] [Related]

  • 5. Subtle Perturbations of the Maize Methylome Reveal Genes and Transposons Silenced by Chromomethylase or RNA-Directed DNA Methylation Pathways.
    Anderson SN, Zynda GJ, Song J, Han Z, Vaughn MW, Li Q, Springer NM.
    G3 (Bethesda); 2018 May 31; 8(6):1921-1932. PubMed ID: 29618467
    [Abstract] [Full Text] [Related]

  • 6. Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
    Wang Y, Zhou X, Luo J, Lv S, Liu R, Du X, Jia B, Yuan F, Zhang H, Du J.
    J Integr Plant Biol; 2021 Jun 31; 63(6):1091-1096. PubMed ID: 33913587
    [Abstract] [Full Text] [Related]

  • 7. Full-length autonomous transposable elements are preferentially targeted by expression-dependent forms of RNA-directed DNA methylation.
    Panda K, Ji L, Neumann DA, Daron J, Schmitz RJ, Slotkin RK.
    Genome Biol; 2016 Aug 09; 17(1):170. PubMed ID: 27506905
    [Abstract] [Full Text] [Related]

  • 8. Maize RNA PolIV affects the expression of genes with nearby TE insertions and has a genome-wide repressive impact on transcription.
    Forestan C, Farinati S, Aiese Cigliano R, Lunardon A, Sanseverino W, Varotto S.
    BMC Plant Biol; 2017 Oct 12; 17(1):161. PubMed ID: 29025411
    [Abstract] [Full Text] [Related]

  • 9. DDM1 Represses Noncoding RNA Expression and RNA-Directed DNA Methylation in Heterochromatin.
    Tan F, Lu Y, Jiang W, Wu T, Zhang R, Zhao Y, Zhou DX.
    Plant Physiol; 2018 Jul 12; 177(3):1187-1197. PubMed ID: 29794169
    [Abstract] [Full Text] [Related]

  • 10. Chromatin structure and gene expression changes associated with loss of MOP1 activity in Zea mays.
    Madzima TF, Huang J, McGinnis KM.
    Epigenetics; 2014 Jul 12; 9(7):1047-59. PubMed ID: 24786611
    [Abstract] [Full Text] [Related]

  • 11. AGO104 is a RdDM effector of paramutation at the maize b1 locus.
    Aubert J, Bellegarde F, Oltehua-Lopez O, Leblanc O, Arteaga-Vazquez MA, Martienssen RA, Grimanelli D.
    PLoS One; 2022 Jul 12; 17(8):e0273695. PubMed ID: 36040902
    [Abstract] [Full Text] [Related]

  • 12. ARGONAUTE 6 bridges transposable element mRNA-derived siRNAs to the establishment of DNA methylation.
    McCue AD, Panda K, Nuthikattu S, Choudury SG, Thomas EN, Slotkin RK.
    EMBO J; 2015 Jan 02; 34(1):20-35. PubMed ID: 25388951
    [Abstract] [Full Text] [Related]

  • 13. CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize.
    Gent JI, Ellis NA, Guo L, Harkess AE, Yao Y, Zhang X, Dawe RK.
    Genome Res; 2013 Apr 02; 23(4):628-37. PubMed ID: 23269663
    [Abstract] [Full Text] [Related]

  • 14. The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA.
    Regulski M, Lu Z, Kendall J, Donoghue MT, Reinders J, Llaca V, Deschamps S, Smith A, Levy D, McCombie WR, Tingey S, Rafalski A, Hicks J, Ware D, Martienssen RA.
    Genome Res; 2013 Oct 02; 23(10):1651-62. PubMed ID: 23739895
    [Abstract] [Full Text] [Related]

  • 15. The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs.
    Nuthikattu S, McCue AD, Panda K, Fultz D, DeFraia C, Thomas EN, Slotkin RK.
    Plant Physiol; 2013 May 02; 162(1):116-31. PubMed ID: 23542151
    [Abstract] [Full Text] [Related]

  • 16. Redistribution of CHH Methylation and Small Interfering RNAs across the Genome of Tomato ddm1 Mutants.
    Corem S, Doron-Faigenboim A, Jouffroy O, Maumus F, Arazi T, Bouché N.
    Plant Cell; 2018 Jul 02; 30(7):1628-1644. PubMed ID: 29875274
    [Abstract] [Full Text] [Related]

  • 17. RNA m6A modification facilitates DNA methylation during maize kernel development.
    Luo JH, Guo T, Wang M, Liu JH, Zheng LM, He Y.
    Plant Physiol; 2024 Mar 29; 194(4):2165-2182. PubMed ID: 37995374
    [Abstract] [Full Text] [Related]

  • 18. Genome-wide identification of endogenous RNA-directed DNA methylation loci associated with abundant 21-nucleotide siRNAs in Arabidopsis.
    Zhao JH, Fang YY, Duan CG, Fang RX, Ding SW, Guo HS.
    Sci Rep; 2016 Oct 27; 6():36247. PubMed ID: 27786269
    [Abstract] [Full Text] [Related]

  • 19. CHH DNA methylation increases at 24-PHAS loci depend on 24-nt phased small interfering RNAs in maize meiotic anthers.
    Zhang M, Ma X, Wang C, Li Q, Meyers BC, Springer NM, Walbot V.
    New Phytol; 2021 Mar 27; 229(5):2984-2997. PubMed ID: 33135165
    [Abstract] [Full Text] [Related]

  • 20. Optimized reduced representation bisulfite sequencing reveals tissue-specific mCHH islands in maize.
    Hsu FM, Yen MR, Wang CT, Lin CY, Wang CR, Chen PY.
    Epigenetics Chromatin; 2017 Aug 30; 10(1):42. PubMed ID: 28854962
    [Abstract] [Full Text] [Related]

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