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Journal Abstract Search

191 related items for PubMed ID: 34572563

  • 1. Advanced Molecular Dynamics Approaches to Model a Tertiary Complex APRIL/TACI with Long Glycosaminoglycans.
    Marcisz M, Maszota-Zieleniak M, Huard B, Samsonov SA.
    Biomolecules; 2021 Sep 12; 11(9):. PubMed ID: 34572563
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  • 4. Repulsive Scaling Replica Exchange Molecular Dynamics in Modeling Protein-Glycosaminoglycan Complexes.
    Marcisz M, Maszota-Zieleniak M, Samsonov SA.
    Methods Mol Biol; 2023 Sep 12; 2619():153-167. PubMed ID: 36662469
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  • 6. Explicit solvent repulsive scaling replica exchange molecular dynamics (RS-REMD) in molecular modeling of protein-glycosaminoglycan complexes.
    Marcisz M, Gaardløs M, Bojarski KK, Siebenmorgen T, Zacharias M, Samsonov SA.
    J Comput Chem; 2022 Sep 15; 43(24):1633-1640. PubMed ID: 35796487
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  • 7. In Silico Identification of Novel APRIL Peptide Antagonists and Binding Insights by Molecular Modeling and Immunosorbent Assays.
    Silva JH, Calmon-Hamaty F, Savino W, Hahne M, Caffarena ER.
    Protein Pept Lett; 2015 Sep 15; 22(5):432-42. PubMed ID: 25731591
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  • 8. Structural Insights into Endostatin-Heparan Sulfate Interactions Using Modeling Approaches.
    Uciechowska-Kaczmarzyk U, Frank M, Samsonov SA, Maszota-Zieleniak M.
    Molecules; 2024 Aug 26; 29(17):. PubMed ID: 39274888
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  • 9. Coarse-grained model of glycosaminoglycans.
    Samsonov SA, Bichmann L, Pisabarro MT.
    J Chem Inf Model; 2015 Jan 26; 55(1):114-24. PubMed ID: 25490039
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  • 10. Transmembrane activator, calcium modulator, and cyclophilin ligand interactor drives plasma cell differentiation in LPS-activated B cells.
    Ozcan E, Garibyan L, Lee JJ, Bram RJ, Lam KP, Geha RS.
    J Allergy Clin Immunol; 2009 Jun 26; 123(6):1277-86.e5. PubMed ID: 19427685
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  • 11. The design and characterization of receptor-selective APRIL variants.
    Kimberley FC, van der Sloot AM, Guadagnoli M, Cameron K, Schneider P, Marquart JA, Versloot M, Serrano L, Medema JP.
    J Biol Chem; 2012 Oct 26; 287(44):37434-46. PubMed ID: 22961987
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  • 13. Modeling Protein-Glycosaminoglycan Complexes: Does the Size Matter?
    Marcisz M, Zacharias M, Samsonov SA.
    J Chem Inf Model; 2021 Sep 27; 61(9):4475-4485. PubMed ID: 34494837
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  • 18. A proliferation-inducing ligand mediates follicular lymphoma B-cell proliferation and cyclin D1 expression through phosphatidylinositol 3-kinase-regulated mammalian target of rapamycin activation.
    Gupta M, Dillon SR, Ziesmer SC, Feldman AL, Witzig TE, Ansell SM, Cerhan JR, Novak AJ.
    Blood; 2009 May 21; 113(21):5206-16. PubMed ID: 19321861
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  • 20. Molecular Dynamics Approaches Dissect Molecular Mechanisms Underlying Methylene Blue-Glycosaminoglycan Interactions.
    Maszota-Zieleniak M, Zsila F, Samsonov SA.
    Molecules; 2022 Apr 20; 27(9):. PubMed ID: 35566005
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