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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

241 related items for PubMed ID: 34629071

  • 21. OpenGenomeBrowser: a versatile, dataset-independent and scalable web platform for genome data management and comparative genomics.
    Roder T, Oberhänsli S, Shani N, Bruggmann R.
    BMC Genomics; 2022 Dec 27; 23(1):855. PubMed ID: 36575383
    [Abstract] [Full Text] [Related]

  • 22. MafFilter: a highly flexible and extensible multiple genome alignment files processor.
    Dutheil JY, Gaillard S, Stukenbrock EH.
    BMC Genomics; 2014 Jan 22; 15():53. PubMed ID: 24447531
    [Abstract] [Full Text] [Related]

  • 23. MakeHub: Fully Automated Generation of UCSC Genome Browser Assembly Hubs.
    Hoff KJ.
    Genomics Proteomics Bioinformatics; 2019 Oct 22; 17(5):546-549. PubMed ID: 32001327
    [Abstract] [Full Text] [Related]

  • 24. NeuroPycon: An open-source python toolbox for fast multi-modal and reproducible brain connectivity pipelines.
    Meunier D, Pascarella A, Altukhov D, Jas M, Combrisson E, Lajnef T, Bertrand-Dubois D, Hadid V, Alamian G, Alves J, Barlaam F, Saive AL, Dehgan A, Jerbi K.
    Neuroimage; 2020 Oct 01; 219():117020. PubMed ID: 32522662
    [Abstract] [Full Text] [Related]

  • 25. Genome Annotator Light (GAL): A Docker-based package for genome analysis and visualization.
    Panda A, Chaudhari NM, Tripathy S.
    Genomics; 2020 Jan 01; 112(1):127-134. PubMed ID: 30926570
    [Abstract] [Full Text] [Related]

  • 26. ABrowse--a customizable next-generation genome browser framework.
    Kong L, Wang J, Zhao S, Gu X, Luo J, Gao G.
    BMC Bioinformatics; 2012 Jan 05; 13():2. PubMed ID: 22222089
    [Abstract] [Full Text] [Related]

  • 27. RNASeqBrowser: a genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks.
    An J, Lai J, Wood DL, Sajjanhar A, Wang C, Tevz G, Lehman ML, Nelson CC.
    BMC Genomics; 2015 Mar 01; 16(1):145. PubMed ID: 25766521
    [Abstract] [Full Text] [Related]

  • 28. Savant Genome Browser 2: visualization and analysis for population-scale genomics.
    Fiume M, Smith EJ, Brook A, Strbenac D, Turner B, Mezlini AM, Robinson MD, Wodak SJ, Brudno M.
    Nucleic Acids Res; 2012 Jul 01; 40(Web Server issue):W615-21. PubMed ID: 22638571
    [Abstract] [Full Text] [Related]

  • 29. The UCSC Genome Browser database: 2019 update.
    Haeussler M, Zweig AS, Tyner C, Speir ML, Rosenbloom KR, Raney BJ, Lee CM, Lee BT, Hinrichs AS, Gonzalez JN, Gibson D, Diekhans M, Clawson H, Casper J, Barber GP, Haussler D, Kuhn RM, Kent WJ.
    Nucleic Acids Res; 2019 Jan 08; 47(D1):D853-D858. PubMed ID: 30407534
    [Abstract] [Full Text] [Related]

  • 30. The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button.
    Swertz MA, Dijkstra M, Adamusiak T, van der Velde JK, Kanterakis A, Roos ET, Lops J, Thorisson GA, Arends D, Byelas G, Muilu J, Brookes AJ, de Brock EO, Jansen RC, Parkinson H.
    BMC Bioinformatics; 2010 Dec 21; 11 Suppl 12(Suppl 12):S12. PubMed ID: 21210979
    [Abstract] [Full Text] [Related]

  • 31. Pergola-web: a web server for the visualization and analysis of longitudinal behavioral data using repurposed genomics tools and standards.
    Espinosa-Carrasco J, Pulido TH, Erb I, Dierssen M, Ponomarenko J, Notredame C.
    Nucleic Acids Res; 2019 Jul 02; 47(W1):W600-W604. PubMed ID: 31106365
    [Abstract] [Full Text] [Related]

  • 32. Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit.
    Lavikka K, Oikkonen J, Li Y, Muranen T, Micoli G, Marchi G, Lahtinen A, Huhtinen K, Lehtonen R, Hietanen S, Hynninen J, Virtanen A, Hautaniemi S.
    Gigascience; 2024 Jan 02; 13():. PubMed ID: 39101783
    [Abstract] [Full Text] [Related]

  • 33. Plastid: nucleotide-resolution analysis of next-generation sequencing and genomics data.
    Dunn JG, Weissman JS.
    BMC Genomics; 2016 Nov 22; 17(1):958. PubMed ID: 27875984
    [Abstract] [Full Text] [Related]

  • 34. AMRViz enables seamless genomics analysis and visualization of antimicrobial resistance.
    Le DQ, Nguyen SH, Nguyen TT, Nguyen CH, Ho TH, Vo NS, Nguyen T, Nguyen HA, Cao MD.
    BMC Bioinformatics; 2024 May 16; 25(1):193. PubMed ID: 38755527
    [Abstract] [Full Text] [Related]

  • 35. Visualization Tools for Genomic Conservation.
    Bandi V, Gutwin C, Siri JN, Neufeld E, Sharpe A, Parkin I.
    Methods Mol Biol; 2022 May 16; 2443():285-308. PubMed ID: 35037213
    [Abstract] [Full Text] [Related]

  • 36. The Genome Explorer genome browser.
    Herson J, Krummenacker M, Spaulding A, O'Maille P, Karp PD.
    mSystems; 2024 Jul 23; 9(7):e0026724. PubMed ID: 38958457
    [Abstract] [Full Text] [Related]

  • 37. CellTrackVis: interactive browser-based visualization for analyzing cell trajectories and lineages.
    Shim C, Kim W, Nguyen TTD, Kim DY, Choi YS, Chung YD.
    BMC Bioinformatics; 2023 Mar 29; 24(1):124. PubMed ID: 36991341
    [Abstract] [Full Text] [Related]

  • 38. Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets.
    Monfort M, Furlong EEM, Girardot C.
    Bioinformatics; 2017 Jul 15; 33(14):2194-2196. PubMed ID: 28334301
    [Abstract] [Full Text] [Related]

  • 39. Cascade: an RNA-seq visualization tool for cancer genomics.
    Shifman AR, Johnson RM, Wilhelm BT.
    BMC Genomics; 2016 Jan 25; 17():75. PubMed ID: 26810393
    [Abstract] [Full Text] [Related]

  • 40. Comut-viz: efficiently creating and browsing comutation plots online.
    Duan Q, Wang W, Feng F, Jiang X, Chen H, Zhang D, Zhang T.
    BMC Bioinformatics; 2023 Jun 01; 24(1):226. PubMed ID: 37264324
    [Abstract] [Full Text] [Related]

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