These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

225 related items for PubMed ID: 34669947

  • 21. Building Transcription Factor Binding Site Models to Understand Gene Regulation in Plants.
    Lai X, Stigliani A, Vachon G, Carles C, Smaczniak C, Zubieta C, Kaufmann K, Parcy F.
    Mol Plant; 2019 Jun 03; 12(6):743-763. PubMed ID: 30447332
    [Abstract] [Full Text] [Related]

  • 22. Enhancement of gene expression noise from transcription factor binding to genomic decoy sites.
    Dey S, Soltani M, Singh A.
    Sci Rep; 2020 Jun 04; 10(1):9126. PubMed ID: 32499583
    [Abstract] [Full Text] [Related]

  • 23. The influence of promoter architectures and regulatory motifs on gene expression in Escherichia coli.
    Rydenfelt M, Garcia HG, Cox RS, Phillips R.
    PLoS One; 2014 Jun 04; 9(12):e114347. PubMed ID: 25549361
    [Abstract] [Full Text] [Related]

  • 24. Transcription factor binding sites detection by using alignment-based approach.
    Mahdevar G, Sadeghi M, Nowzari-Dalini A.
    J Theor Biol; 2012 Jul 07; 304():96-102. PubMed ID: 22504445
    [Abstract] [Full Text] [Related]

  • 25. Widespread Strain-Specific Distinctions in Chromosomal Binding Dynamics of a Highly Conserved Escherichia coli Transcription Factor.
    Connolly JPR, O'Boyle N, Roe AJ.
    mBio; 2020 Jun 23; 11(3):. PubMed ID: 32576674
    [Abstract] [Full Text] [Related]

  • 26. Nonspecific transcription factor binding can reduce noise in the expression of downstream proteins.
    Soltani M, Bokes P, Fox Z, Singh A.
    Phys Biol; 2015 Aug 12; 12(5):055002. PubMed ID: 26267711
    [Abstract] [Full Text] [Related]

  • 27. A regulatory role for repeated decoy transcription factor binding sites in target gene expression.
    Lee TH, Maheshri N.
    Mol Syst Biol; 2012 Mar 27; 8():576. PubMed ID: 22453733
    [Abstract] [Full Text] [Related]

  • 28. Prediction of Transcription Factor Binding Sites on Cell-Free DNA Based on Deep Learning.
    Qi T, Zhou Y, Sheng Y, Li Z, Yang Y, Liu Q, Ge Q.
    J Chem Inf Model; 2024 May 27; 64(10):4002-4008. PubMed ID: 38798191
    [Abstract] [Full Text] [Related]

  • 29. Degenerate Pax2 and Senseless binding motifs improve detection of low-affinity sites required for enhancer specificity.
    Zandvakili A, Campbell I, Gutzwiller LM, Weirauch MT, Gebelein B.
    PLoS Genet; 2018 Apr 27; 14(4):e1007289. PubMed ID: 29617378
    [Abstract] [Full Text] [Related]

  • 30. Identification of transcription factor co-binding patterns with non-negative matrix factorization.
    Rauluseviciute I, Launay T, Barzaghi G, Nikumbh S, Lenhard B, Krebs AR, Castro-Mondragon JA, Mathelier A.
    Nucleic Acids Res; 2024 Oct 14; 52(18):e85. PubMed ID: 39217462
    [Abstract] [Full Text] [Related]

  • 31. LASAGNA-Search: an integrated web tool for transcription factor binding site search and visualization.
    Lee C, Huang CH.
    Biotechniques; 2013 Mar 14; 54(3):141-53. PubMed ID: 23599922
    [Abstract] [Full Text] [Related]

  • 32. Predicting Transcription Factor Binding Sites and Their Cognate Transcription Factors Using Gene Expression Data.
    Yu CP, Li WH.
    Methods Mol Biol; 2017 Mar 14; 1629():271-282. PubMed ID: 28623591
    [Abstract] [Full Text] [Related]

  • 33. The patterns of histone modifications in the vicinity of transcription factor binding sites in human lymphoblastoid cell lines.
    Nie Y, Liu H, Sun X.
    PLoS One; 2013 Mar 14; 8(3):e60002. PubMed ID: 23527292
    [Abstract] [Full Text] [Related]

  • 34. Transcription profile of Escherichia coli: genomic SELEX search for regulatory targets of transcription factors.
    Ishihama A, Shimada T, Yamazaki Y.
    Nucleic Acids Res; 2016 Mar 18; 44(5):2058-74. PubMed ID: 26843427
    [Abstract] [Full Text] [Related]

  • 35. From sequence to dynamics: the effects of transcription factor and polymerase concentration changes on activated and repressed promoters.
    Pérez AG, Angarica VE, Collado-Vides J, Vasconcelos AT.
    BMC Mol Biol; 2009 Sep 22; 10():92. PubMed ID: 19772633
    [Abstract] [Full Text] [Related]

  • 36. Statistics of protein-DNA binding and the total number of binding sites for a transcription factor in the mammalian genome.
    Kuznetsov VA, Singh O, Jenjaroenpun P.
    BMC Genomics; 2010 Feb 10; 11 Suppl 1(Suppl 1):S12. PubMed ID: 20158869
    [Abstract] [Full Text] [Related]

  • 37. Bayesian variable selection for gene expression modeling with regulatory motif binding sites in neuroinflammatory events.
    Liu KY, Zhou X, Kan K, Wong ST.
    Neuroinformatics; 2006 Feb 10; 4(1):95-117. PubMed ID: 16595861
    [Abstract] [Full Text] [Related]

  • 38. Improved predictions of transcription factor binding sites using physicochemical features of DNA.
    Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F.
    Nucleic Acids Res; 2012 Dec 10; 40(22):e175. PubMed ID: 22923524
    [Abstract] [Full Text] [Related]

  • 39. Homeologs of Brassica SOC1, a central regulator of flowering time, are differentially regulated due to partitioning of evolutionarily conserved transcription factor binding sites in promoters.
    Sri T, Gupta B, Tyagi S, Singh A.
    Mol Phylogenet Evol; 2020 Jun 10; 147():106777. PubMed ID: 32126279
    [Abstract] [Full Text] [Related]

  • 40. A comprehensive alanine scanning mutagenesis of the Escherichia coli transcriptional activator SoxS: identifying amino acids important for DNA binding and transcription activation.
    Griffith KL, Wolf RE.
    J Mol Biol; 2002 Sep 13; 322(2):237-57. PubMed ID: 12217688
    [Abstract] [Full Text] [Related]

    Page: [Previous] [Next] [New Search]
    of 12.