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Journal Abstract Search

261 related items for PubMed ID: 35583320

  • 1. Homologs of the Escherichia coli F Element Protein TraR, Including Phage Lambda Orf73, Directly Reprogram Host Transcription.
    Gopalkrishnan S, Ross W, Akbari MS, Li X, Haycocks JRJ, Grainger DC, Court DL, Gourse RL.
    mBio; 2022 Jun 28; 13(3):e0095222. PubMed ID: 35583320
    [Abstract] [Full Text] [Related]

  • 2. TraR directly regulates transcription initiation by mimicking the combined effects of the global regulators DksA and ppGpp.
    Gopalkrishnan S, Ross W, Chen AY, Gourse RL.
    Proc Natl Acad Sci U S A; 2017 Jul 11; 114(28):E5539-E5548. PubMed ID: 28652326
    [Abstract] [Full Text] [Related]

  • 3. Transcription from bacteriophage lambda pR promoter is regulated independently and antagonistically by DksA and ppGpp.
    Łyzen R, Kochanowska M, Wegrzyn G, Szalewska-Palasz A.
    Nucleic Acids Res; 2009 Nov 11; 37(20):6655-64. PubMed ID: 19759216
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  • 5. TraR, a homolog of a RNAP secondary channel interactor, modulates transcription.
    Blankschien MD, Potrykus K, Grace E, Choudhary A, Vinella D, Cashel M, Herman C.
    PLoS Genet; 2009 Jan 11; 5(1):e1000345. PubMed ID: 19148274
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  • 6. DksA potentiates direct activation of amino acid promoters by ppGpp.
    Paul BJ, Berkmen MB, Gourse RL.
    Proc Natl Acad Sci U S A; 2005 May 31; 102(22):7823-8. PubMed ID: 15899978
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  • 7. The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription.
    Bernardo LM, Johansson LU, Solera D, Skärfstad E, Shingler V.
    Mol Microbiol; 2006 May 31; 60(3):749-64. PubMed ID: 16629675
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  • 8. A proximal promoter element required for positive transcriptional control by guanosine tetraphosphate and DksA protein during the stringent response.
    Gummesson B, Lovmar M, Nyström T.
    J Biol Chem; 2013 Jul 19; 288(29):21055-21064. PubMed ID: 23749992
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  • 9. DksA and ppGpp Regulate the σS Stress Response by Activating Promoters for the Small RNA DsrA and the Anti-Adapter Protein IraP.
    Girard ME, Gopalkrishnan S, Grace ED, Halliday JA, Gourse RL, Herman C.
    J Bacteriol; 2018 Jan 15; 200(2):. PubMed ID: 29061665
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  • 10. Properties of RNA polymerase bypass mutants: implications for the role of ppGpp and its co-factor DksA in controlling transcription dependent on sigma54.
    Szalewska-Palasz A, Johansson LUM, Bernardo LMD, Skärfstad E, Stec E, Brännström K, Shingler V.
    J Biol Chem; 2007 Jun 22; 282(25):18046-18056. PubMed ID: 17456470
    [Abstract] [Full Text] [Related]

  • 11. Activation of the σE-dependent stress pathway by conjugative TraR may anticipate conjugational stress.
    Grace ED, Gopalkrishnan S, Girard ME, Blankschien MD, Ross W, Gourse RL, Herman C.
    J Bacteriol; 2015 Mar 22; 197(5):924-31. PubMed ID: 25535270
    [Abstract] [Full Text] [Related]

  • 12. E. coli TraR allosterically regulates transcription initiation by altering RNA polymerase conformation.
    Chen J, Gopalkrishnan S, Chiu C, Chen AY, Campbell EA, Gourse RL, Ross W, Darst SA.
    Elife; 2019 Dec 16; 8():. PubMed ID: 31841111
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  • 13. Promoter-specific control of E. coli RNA polymerase by ppGpp and a general transcription factor.
    Roberts JW.
    Genes Dev; 2009 Jan 15; 23(2):143-6. PubMed ID: 19171778
    [Abstract] [Full Text] [Related]

  • 14. Genome-wide effects on Escherichia coli transcription from ppGpp binding to its two sites on RNA polymerase.
    Sanchez-Vazquez P, Dewey CN, Kitten N, Ross W, Gourse RL.
    Proc Natl Acad Sci U S A; 2019 Apr 23; 116(17):8310-8319. PubMed ID: 30971496
    [Abstract] [Full Text] [Related]

  • 15. The dual role of DksA protein in the regulation of Escherichia coli pArgX promoter.
    Łyżeń R, Maitra A, Milewska K, Kochanowska-Łyżeń M, Hernandez VJ, Szalewska-Pałasz A.
    Nucleic Acids Res; 2016 Dec 01; 44(21):10316-10325. PubMed ID: 27915292
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  • 16. ppGpp Binding to a Site at the RNAP-DksA Interface Accounts for Its Dramatic Effects on Transcription Initiation during the Stringent Response.
    Ross W, Sanchez-Vazquez P, Chen AY, Lee JH, Burgos HL, Gourse RL.
    Mol Cell; 2016 Jun 16; 62(6):811-823. PubMed ID: 27237053
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  • 18. Effects of DksA, GreA, and GreB on transcription initiation: insights into the mechanisms of factors that bind in the secondary channel of RNA polymerase.
    Rutherford ST, Lemke JJ, Vrentas CE, Gaal T, Ross W, Gourse RL.
    J Mol Biol; 2007 Mar 02; 366(4):1243-57. PubMed ID: 17207814
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