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Journal Abstract Search

230 related items for PubMed ID: 35639335

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  • 4. CoMet: a workflow using contig coverage and composition for binning a metagenomic sample with high precision.
    Herath D, Tang SL, Tandon K, Ackland D, Halgamuge SK.
    BMC Bioinformatics; 2017 Dec 28; 18(Suppl 16):571. PubMed ID: 29297295
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  • 5. MetaCon: unsupervised clustering of metagenomic contigs with probabilistic k-mers statistics and coverage.
    Qian J, Comin M.
    BMC Bioinformatics; 2019 Nov 22; 20(Suppl 9):367. PubMed ID: 31757198
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  • 6. MetaCRS: unsupervised clustering of contigs with the recursive strategy of reducing metagenomic dataset's complexity.
    Jiang Z, Li X, Guo L.
    BMC Bioinformatics; 2022 Jan 20; 22(Suppl 12):315. PubMed ID: 35045830
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  • 8. AFITbin: a metagenomic contig binning method using aggregate l-mer frequency based on initial and terminal nucleotides.
    Darabi A, Sobhani S, Aghdam R, Eslahchi C.
    BMC Bioinformatics; 2024 Jul 16; 25(1):241. PubMed ID: 39014300
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  • 12. A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio.
    Leung HC, Yiu SM, Yang B, Peng Y, Wang Y, Liu Z, Chen J, Qin J, Li R, Chin FY.
    Bioinformatics; 2011 Jun 01; 27(11):1489-95. PubMed ID: 21493653
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  • 14. HiFine: integrating Hi-C-based and shotgun-based methods to refine binning of metagenomic contigs.
    Du Y, Sun F.
    Bioinformatics; 2022 May 26; 38(11):2973-2979. PubMed ID: 35482530
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  • 15. Accurate binning of metagenomic contigs via automated clustering sequences using information of genomic signatures and marker genes.
    Lin HH, Liao YC.
    Sci Rep; 2016 Apr 12; 6():24175. PubMed ID: 27067514
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  • 19. Effective binning of metagenomic contigs using contrastive multi-view representation learning.
    Wang Z, You R, Han H, Liu W, Sun F, Zhu S.
    Nat Commun; 2024 Jan 17; 15(1):585. PubMed ID: 38233391
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  • 20. Binning metagenomic contigs by coverage and composition.
    Alneberg J, Bjarnason BS, de Bruijn I, Schirmer M, Quick J, Ijaz UZ, Lahti L, Loman NJ, Andersson AF, Quince C.
    Nat Methods; 2014 Nov 17; 11(11):1144-6. PubMed ID: 25218180
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