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Journal Abstract Search

227 related items for PubMed ID: 35907023

  • 1. Evaluation of Full-Length Versus V4-Region 16S rRNA Sequencing for Phylogenetic Analysis of Mouse Intestinal Microbiota After a Dietary Intervention.
    Katiraei S, Anvar Y, Hoving L, Berbée JFP, van Harmelen V, Willems van Dijk K.
    Curr Microbiol; 2022 Jul 30; 79(9):276. PubMed ID: 35907023
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  • 6. Effects of Waterlogging on Soybean Rhizosphere Bacterial Community Using V4, LoopSeq, and PacBio 16S rRNA Sequence.
    Yu T, Cheng L, Liu Q, Wang S, Zhou Y, Zhong H, Tang M, Nian H, Lian T.
    Microbiol Spectr; 2022 Feb 23; 10(1):e0201121. PubMed ID: 35171049
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  • 7. Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples.
    Buetas E, Jordán-López M, López-Roldán A, D'Auria G, Martínez-Priego L, De Marco G, Carda-Diéguez M, Mira A.
    BMC Genomics; 2024 Mar 25; 25(1):310. PubMed ID: 38528457
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  • 12. A multi-amplicon 16S rRNA sequencing and analysis method for improved taxonomic profiling of bacterial communities.
    Schriefer AE, Cliften PF, Hibberd MC, Sawyer C, Brown-Kennerly V, Burcea L, Klotz E, Crosby SD, Gordon JI, Head RD.
    J Microbiol Methods; 2018 Nov 25; 154():6-13. PubMed ID: 30273610
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  • 13. Improved DNA Extraction and Amplification Strategy for 16S rRNA Gene Amplicon-Based Microbiome Studies.
    Hong BY, Driscoll M, Gratalo D, Jarvie T, Weinstock GM.
    Int J Mol Sci; 2024 Mar 04; 25(5):. PubMed ID: 38474213
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  • 14. Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome.
    Salamon D, Zapała B, Krawczyk A, Potasiewicz A, Nikiforuk A, Stój A, Gosiewski T.
    Appl Microbiol Biotechnol; 2022 Nov 04; 106(22):7671-7681. PubMed ID: 36322250
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  • 15. A 16S rRNA gene sequencing and analysis protocol for the Illumina MiniSeq platform.
    Pichler M, Coskun ÖK, Ortega-Arbulú AS, Conci N, Wörheide G, Vargas S, Orsi WD.
    Microbiologyopen; 2018 Dec 04; 7(6):e00611. PubMed ID: 29575567
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  • 16. A comparison between full-length 16S rRNA Oxford nanopore sequencing and Illumina V3-V4 16S rRNA sequencing in head and neck cancer tissues.
    Yeo K, Connell J, Bouras G, Smith E, Murphy W, Hodge JC, Krishnan S, Wormald PJ, Valentine R, Psaltis AJ, Vreugde S, Fenix KA.
    Arch Microbiol; 2024 May 07; 206(6):248. PubMed ID: 38713383
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  • 17. A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome.
    Allali I, Arnold JW, Roach J, Cadenas MB, Butz N, Hassan HM, Koci M, Ballou A, Mendoza M, Ali R, Azcarate-Peril MA.
    BMC Microbiol; 2017 Sep 13; 17(1):194. PubMed ID: 28903732
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  • 18. Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets.
    F Escapa I, Huang Y, Chen T, Lin M, Kokaras A, Dewhirst FE, Lemon KP.
    Microbiome; 2020 May 15; 8(1):65. PubMed ID: 32414415
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  • 19. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
    Ogier JC, Pagès S, Galan M, Barret M, Gaudriault S.
    BMC Microbiol; 2019 Jul 29; 19(1):171. PubMed ID: 31357928
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  • 20. Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing.
    Shin J, Lee S, Go MJ, Lee SY, Kim SC, Lee CH, Cho BK.
    Sci Rep; 2016 Jul 14; 6():29681. PubMed ID: 27411898
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