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126 related items for PubMed ID: 35994329

  • 1. Markov State Models and Molecular Dynamics Simulations Reveal the Conformational Transition of the Intrinsically Disordered Hypervariable Region of K-Ras4B to the Ordered Conformation.
    Zhang H, Ni D, Fan J, Li M, Zhang J, Hua C, Nussinov R, Lu S.
    J Chem Inf Model; 2022 Sep 12; 62(17):4222-4231. PubMed ID: 35994329
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  • 2. GTP Binding and Oncogenic Mutations May Attenuate Hypervariable Region (HVR)-Catalytic Domain Interactions in Small GTPase K-Ras4B, Exposing the Effector Binding Site.
    Lu S, Banerjee A, Jang H, Zhang J, Gaponenko V, Nussinov R.
    J Biol Chem; 2015 Nov 27; 290(48):28887-900. PubMed ID: 26453300
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  • 3. The higher level of complexity of K-Ras4B activation at the membrane.
    Jang H, Banerjee A, Chavan TS, Lu S, Zhang J, Gaponenko V, Nussinov R.
    FASEB J; 2016 Apr 27; 30(4):1643-55. PubMed ID: 26718888
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  • 4. Mechanisms of membrane binding of small GTPase K-Ras4B farnesylated hypervariable region.
    Jang H, Abraham SJ, Chavan TS, Hitchinson B, Khavrutskii L, Tarasova NI, Nussinov R, Gaponenko V.
    J Biol Chem; 2015 Apr 10; 290(15):9465-77. PubMed ID: 25713064
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  • 7. Comparison of the Conformations of KRAS Isoforms, K-Ras4A and K-Ras4B, Points to Similarities and Significant Differences.
    Chakrabarti M, Jang H, Nussinov R.
    J Phys Chem B; 2016 Feb 04; 120(4):667-79. PubMed ID: 26761128
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  • 8. The disordered hypervariable region and the folded catalytic domain of oncogenic K-Ras4B partner in phospholipid binding.
    Banerjee A, Jang H, Nussinov R, Gaponenko V.
    Curr Opin Struct Biol; 2016 Feb 04; 36():10-7. PubMed ID: 26709496
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  • 9. Insight into the mechanism of allosteric activation of PI3Kα by oncoprotein K-Ras4B.
    Li X, Dai J, Ni D, He X, Zhang H, Zhang J, Fu Q, Liu Y, Lu S.
    Int J Biol Macromol; 2020 Feb 01; 144():643-655. PubMed ID: 31816384
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  • 13. Oncogenic K-Ras4B Dimerization Enhances Downstream Mitogen-activated Protein Kinase Signaling.
    Muratcioglu S, Aydin C, Odabasi E, Ozdemir ES, Firat-Karalar EN, Jang H, Tsai CJ, Nussinov R, Kavakli IH, Gursoy A, Keskin O.
    J Mol Biol; 2020 Feb 14; 432(4):1199-1215. PubMed ID: 31931009
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  • 14. The Hypervariable Region of K-Ras4B Governs Molecular Recognition and Function.
    Abdelkarim H, Banerjee A, Grudzien P, Leschinsky N, Abushaer M, Gaponenko V.
    Int J Mol Sci; 2019 Nov 14; 20(22):. PubMed ID: 31739603
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  • 15. The hypervariable region of K-Ras4B is responsible for its specific interactions with calmodulin.
    Abraham SJ, Nolet RP, Calvert RJ, Anderson LM, Gaponenko V.
    Biochemistry; 2009 Aug 18; 48(32):7575-83. PubMed ID: 19583261
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  • 16. Facile Synthesis of Boc-Protected Selenocystine and its Compatibility with Late-Stage Farnesylation at Cysteine Site.
    Zhu PC, Chen YX.
    Protein Pept Lett; 2021 Aug 18; 28(6):603-611. PubMed ID: 33357178
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  • 17. Conformational Dynamics Allows Sampling of an "Active-like" State by Oncogenic K-Ras-GDP.
    Grudzien P, Jang H, Leschinsky N, Nussinov R, Gaponenko V.
    J Mol Biol; 2022 Sep 15; 434(17):167695. PubMed ID: 35752212
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  • 18. The role of G-domain orientation and nucleotide state on the Ras isoform-specific membrane interaction.
    Kapoor S, Weise K, Erlkamp M, Triola G, Waldmann H, Winter R.
    Eur Biophys J; 2012 Oct 15; 41(10):801-13. PubMed ID: 22851002
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  • 19. Membrane Composition and Raf[CRD]-Membrane Attachment Are Driving Forces for K-Ras4B Dimer Stability.
    Andreadelis I, Kiriakidi S, Lamprakis C, Theodoropoulou A, Doerr S, Chatzigoulas A, Manchester J, Velez-Vega C, Duca JS, Cournia Z.
    J Phys Chem B; 2022 Feb 24; 126(7):1504-1519. PubMed ID: 35142524
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  • 20. Methionine 170 is an Environmentally Sensitive Membrane Anchor in the Disordered HVR of K-Ras4B.
    Neale C, García AE.
    J Phys Chem B; 2018 Nov 08; 122(44):10086-10096. PubMed ID: 30351122
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