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Journal Abstract Search

256 related items for PubMed ID: 36427143

  • 21. Standardized collection of MNase-seq experiments enables unbiased dataset comparisons.
    Rizzo JM, Bard JE, Buck MJ.
    BMC Mol Biol; 2012 May 06; 13():15. PubMed ID: 22559821
    [Abstract] [Full Text] [Related]

  • 22. Asymmetric nucleosomes flank promoters in the budding yeast genome.
    Ramachandran S, Zentner GE, Henikoff S.
    Genome Res; 2015 Mar 06; 25(3):381-90. PubMed ID: 25491770
    [Abstract] [Full Text] [Related]

  • 23. Genome-wide mapping of nucleosome occupancy, histone modifications, and gene expression using next-generation sequencing technology.
    Wei G, Hu G, Cui K, Zhao K.
    Methods Enzymol; 2012 Mar 06; 513():297-313. PubMed ID: 22929775
    [Abstract] [Full Text] [Related]

  • 24. Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in Drosophila melanogaster.
    Chereji RV, Kan TW, Grudniewska MK, Romashchenko AV, Berezikov E, Zhimulev IF, Guryev V, Morozov AV, Moshkin YM.
    Nucleic Acids Res; 2016 Feb 18; 44(3):1036-51. PubMed ID: 26429969
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  • 25. Measuring occupancies of the nucleosome and nucleosome-interacting factors in vivo in Saccharomyces cerevisiae genome-wide.
    Biernat E, Khan U, Govind CK.
    Methods; 2023 Oct 18; 218():167-175. PubMed ID: 37598811
    [Abstract] [Full Text] [Related]

  • 26. MNase Profiling of Promoter Chromatin in Salmonella typhimurium-Stimulated GM12878 Cells Reveals Dynamic and Response-Specific Nucleosome Architecture.
    Cole L, Dennis J.
    G3 (Bethesda); 2020 Jul 07; 10(7):2171-2178. PubMed ID: 32404364
    [Abstract] [Full Text] [Related]

  • 27. Analyses of Promoter , Enhancer, and Nucleosome Organization in Mammalian Cells by MNase-Seq.
    Esnault C, Magat T, García-Oliver E, Andrau JC.
    Methods Mol Biol; 2021 Jul 07; 2351():93-104. PubMed ID: 34382185
    [Abstract] [Full Text] [Related]

  • 28. Application of MNase-Seq in the Global Mapping of Nucleosome Positioning in Plants.
    Zhang W, Jiang J.
    Methods Mol Biol; 2018 Jul 07; 1830():353-366. PubMed ID: 30043381
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  • 29. Differential nuclease sensitivity profiling of chromatin reveals biochemical footprints coupled to gene expression and functional DNA elements in maize.
    Vera DL, Madzima TF, Labonne JD, Alam MP, Hoffman GG, Girimurugan SB, Zhang J, McGinnis KM, Dennis JH, Bass HW.
    Plant Cell; 2014 Oct 07; 26(10):3883-93. PubMed ID: 25361955
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  • 30. Genome-Wide Nucleosome Occupancy and Positioning and Their Impact on Gene Expression and Evolution in Plants.
    Zhang T, Zhang W, Jiang J.
    Plant Physiol; 2015 Aug 07; 168(4):1406-16. PubMed ID: 26143253
    [Abstract] [Full Text] [Related]

  • 31. MPE-seq, a new method for the genome-wide analysis of chromatin structure.
    Ishii H, Kadonaga JT, Ren B.
    Proc Natl Acad Sci U S A; 2015 Jul 07; 112(27):E3457-65. PubMed ID: 26080409
    [Abstract] [Full Text] [Related]

  • 32. Dissection of acute stimulus-inducible nucleosome remodeling in mammalian cells.
    Comoglio F, Simonatto M, Polletti S, Liu X, Smale ST, Barozzi I, Natoli G.
    Genes Dev; 2019 Sep 01; 33(17-18):1159-1174. PubMed ID: 31371436
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  • 33. Quantitative MNase-seq accurately maps nucleosome occupancy levels.
    Chereji RV, Bryson TD, Henikoff S.
    Genome Biol; 2019 Sep 13; 20(1):198. PubMed ID: 31519205
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  • 34. Chemical map-based prediction of nucleosome positioning using the Bioconductor package nuCpos.
    Kato H, Shimizu M, Urano T.
    BMC Bioinformatics; 2021 Jun 13; 22(1):322. PubMed ID: 34120589
    [Abstract] [Full Text] [Related]

  • 35. Micrococcal Nuclease Digestion of Schizosaccharomyces pombe Chromatin.
    Cam HP, Whitehall S.
    Cold Spring Harb Protoc; 2016 Nov 01; 2016(11):. PubMed ID: 27803256
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  • 36. High-Resolution ChIP-MNase Mapping of Nucleosome Positions at Selected Genomic Loci and Alleles.
    van Essen D, Oruba A, Saccani S.
    Methods Mol Biol; 2021 Nov 01; 2351():123-145. PubMed ID: 34382187
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  • 37. Nucleosome fragility is associated with future transcriptional response to developmental cues and stress in C. elegans.
    Jeffers TE, Lieb JD.
    Genome Res; 2017 Jan 01; 27(1):75-86. PubMed ID: 27979995
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  • 38. Genome-Wide Identification of Open Chromatin in Plants Using MH-Seq.
    Zhang A, Li X, Zhao H, Jiang J, Zhang W.
    Methods Mol Biol; 2023 Jan 01; 2594():29-43. PubMed ID: 36264486
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  • 39. MNase Digestion Protection Patterns of the Linker DNA in Chromatosomes.
    Shen CH, Allan J.
    Cells; 2021 Aug 29; 10(9):. PubMed ID: 34571888
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  • 40. Size-based expectation maximization for characterizing nucleosome positions and subtypes.
    Yang J, Yen K, Mahony S.
    Genome Res; 2024 Oct 11; 34(9):1334-1343. PubMed ID: 38886069
    [Abstract] [Full Text] [Related]

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