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Journal Abstract Search

136 related items for PubMed ID: 37399160

  • 21. Protein Complexes Detection Based on Semi-Supervised Network Embedding Model.
    Zhu J, Zheng Z, Yang M, Fung GPC, Huang C.
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(2):797-803. PubMed ID: 31581089
    [Abstract] [Full Text] [Related]

  • 22. Identifying protein complexes based on brainstorming strategy.
    Shen X, Zhou J, Yi L, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():44-53. PubMed ID: 27405005
    [Abstract] [Full Text] [Related]

  • 23. Discovering overlapped protein complexes from weighted PPI networks by removing inter-module hubs.
    Maddi AMA, Eslahchi C.
    Sci Rep; 2017 Jun 12; 7(1):3247. PubMed ID: 28607455
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  • 24. Discovery of protein complexes with core-attachment structures from Tandem Affinity Purification (TAP) data.
    Wu M, Li XL, Kwoh CK, Ng SK, Wong L.
    J Comput Biol; 2012 Sep 12; 19(9):1027-42. PubMed ID: 21777084
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  • 25. PCE-FR: A Novel Method for Identifying Overlapping Protein Complexes in Weighted Protein-Protein Interaction Networks Using Pseudo-Clique Extension Based on Fuzzy Relation.
    Cao B, Luo J, Liang C, Wang S, Ding P.
    IEEE Trans Nanobioscience; 2016 Oct 12; 15(7):728-738. PubMed ID: 27662678
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  • 26. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Oct 12; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 27. Molecular complex detection in protein interaction networks through reinforcement learning.
    Palukuri MV, Patil RS, Marcotte EM.
    BMC Bioinformatics; 2023 Aug 02; 24(1):306. PubMed ID: 37532987
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  • 28. Detecting temporal protein complexes from dynamic protein-protein interaction networks.
    Ou-Yang L, Dai DQ, Li XL, Wu M, Zhang XF, Yang P.
    BMC Bioinformatics; 2014 Oct 04; 15(1):335. PubMed ID: 25282536
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  • 29. Identifying protein complexes from protein-protein interaction networks based on the gene expression profile and core-attachment approach.
    Noori S, Al-A'Araji N, Al-Shamery E.
    J Bioinform Comput Biol; 2021 Jun 04; 19(3):2150009. PubMed ID: 33910494
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  • 30. CAMWI: Detecting protein complexes using weighted clustering coefficient and weighted density.
    Lakizadeh A, Jalili S, Marashi SA.
    Comput Biol Chem; 2015 Oct 04; 58():231-40. PubMed ID: 26319550
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  • 31. Improving protein function prediction using domain and protein complexes in PPI networks.
    Peng W, Wang J, Cai J, Chen L, Li M, Wu FX.
    BMC Syst Biol; 2014 Mar 24; 8():35. PubMed ID: 24655481
    [Abstract] [Full Text] [Related]

  • 32. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
    He J, Li C, Ye B, Zhong W.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
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  • 33. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Jun 25; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
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  • 34. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
    [Abstract] [Full Text] [Related]

  • 35. A three-phase method for identifying functionally related protein groups in weighted PPI networks.
    Grbić M, Matić D, Kartelj A, Vračević S, Filipović V.
    Comput Biol Chem; 2020 Jun 21; 86():107246. PubMed ID: 32339914
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  • 36. Impact of low-confidence interactions on computational identification of protein complexes.
    Paul M, Anand A.
    J Bioinform Comput Biol; 2020 Aug 21; 18(4):2050025. PubMed ID: 32757809
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  • 37. A density-based clustering approach for identifying overlapping protein complexes with functional preferences.
    Hu L, Chan KC.
    BMC Bioinformatics; 2015 May 27; 16():174. PubMed ID: 26013799
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  • 38. A methodology for detecting the orthology signal in a PPI network at a functional complex level.
    Jancura P, Mavridou E, Carrillo-de Santa Pau E, Marchiori E.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S18. PubMed ID: 22759423
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  • 39. Identification of core-attachment complexes based on maximal frequent patterns in protein-protein interaction networks.
    Yu L, Gao L, Kong C.
    Proteomics; 2011 Oct 25; 11(19):3826-34. PubMed ID: 21761565
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  • 40. Detecting Protein Complexes Based on Uncertain Graph Model.
    Zhao B, Wang J, Li M, Wu FX, Pan Y.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Oct 25; 11(3):486-97. PubMed ID: 26356017
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