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Journal Abstract Search

522 related items for PubMed ID: 37800969

  • 21. Microbial Identification Using rRNA Operon Region: Database and Tool for Metataxonomics with Long-Read Sequence.
    Seol D, Lim JS, Sung S, Lee YH, Jeong M, Cho S, Kwak W, Kim H.
    Microbiol Spectr; 2022 Apr 27; 10(2):e0201721. PubMed ID: 35352997
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  • 22. Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples.
    Buetas E, Jordán-López M, López-Roldán A, D'Auria G, Martínez-Priego L, De Marco G, Carda-Diéguez M, Mira A.
    BMC Genomics; 2024 Mar 25; 25(1):310. PubMed ID: 38528457
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  • 23. Comparison of Oxford Nanopore Technologies and Illumina MiSeq sequencing with mock communities and agricultural soil.
    Stevens BM, Creed TB, Reardon CL, Manter DK.
    Sci Rep; 2023 Jun 08; 13(1):9323. PubMed ID: 37291169
    [Abstract] [Full Text] [Related]

  • 24. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
    Myer PR, Kim M, Freetly HC, Smith TPL.
    J Microbiol Methods; 2016 Aug 08; 127():132-140. PubMed ID: 27282101
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  • 25. Comparison of Illumina and Oxford Nanopore Technology for genome analysis of Francisella tularensis, Bacillus anthracis, and Brucella suis.
    Linde J, Brangsch H, Hölzer M, Thomas C, Elschner MC, Melzer F, Tomaso H.
    BMC Genomics; 2023 May 12; 24(1):258. PubMed ID: 37173617
    [Abstract] [Full Text] [Related]

  • 26. Comparative evaluation of analytical pipelines for illumina short- and nanopore long-read 16S rRNA gene amplicon sequencing with mock microbial communities.
    Ota Y, Yasunaga K, Mahazu S, Prah I, Nagai S, Hayashi T, Suzuki M, Yoshida M, Hoshino Y, Akeda Y, Suzuki T, Gu Y, Saito R.
    J Microbiol Methods; 2024 Jun 12; 221():106929. PubMed ID: 38599390
    [Abstract] [Full Text] [Related]

  • 27. Optimization of Oxford Nanopore Technology Sequencing Workflow for Detection of Amplicons in Real Time Using ONT-DART Tool.
    Player R, Verratti K, Staab A, Forsyth E, Ernlund A, Joshi MS, Dunning R, Rozak D, Grady S, Goodwin B, Sozhamannan S.
    Genes (Basel); 2022 Oct 03; 13(10):. PubMed ID: 36292670
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  • 28. MinION™ Nanopore Sequencing of Skin Microbiome 16S and 16S-23S rRNA Gene Amplicons.
    Rozas M, Brillet F, Callewaert C, Paetzold B.
    Front Cell Infect Microbiol; 2021 Oct 03; 11():806476. PubMed ID: 35071053
    [Abstract] [Full Text] [Related]

  • 29. Exploring the potential of Oxford Nanopore Technologies sequencing for Mycobacterium tuberculosis sequencing: An assessment of R10 flowcells and V14 chemistry.
    Dippenaar A, Costa Conceição E, Wells F, Loubser J, Mann B, De Diego Fuertes M, Rennie V, Warren RM, Van Rie A.
    PLoS One; 2024 Oct 03; 19(6):e0303938. PubMed ID: 38843147
    [Abstract] [Full Text] [Related]

  • 30. Improved DNA Extraction and Amplification Strategy for 16S rRNA Gene Amplicon-Based Microbiome Studies.
    Hong BY, Driscoll M, Gratalo D, Jarvie T, Weinstock GM.
    Int J Mol Sci; 2024 Mar 04; 25(5):. PubMed ID: 38474213
    [Abstract] [Full Text] [Related]

  • 31. Development of an efficient antimicrobial susceptibility testing method with species identification by Nanopore sequencing of 16S rRNA amplicons.
    Kawai Y, Ozawa N, Fukuda T, Suzuki N, Mikata K.
    PLoS One; 2022 Mar 04; 17(2):e0262912. PubMed ID: 35113894
    [Abstract] [Full Text] [Related]

  • 32. Nanopore Sequencing Using the Full-Length 16S rRNA Gene for Detection of Blood-Borne Bacteria in Dogs Reveals a Novel Species of Hemotropic Mycoplasma.
    Huggins LG, Colella V, Atapattu U, Koehler AV, Traub RJ.
    Microbiol Spectr; 2022 Dec 21; 10(6):e0308822. PubMed ID: 36250862
    [Abstract] [Full Text] [Related]

  • 33. Characterization of Fecal Microbiota with Clinical Specimen Using Long-Read and Short-Read Sequencing Platform.
    Wei PL, Hung CS, Kao YW, Lin YC, Lee CY, Chang TH, Shia BC, Lin JC.
    Int J Mol Sci; 2020 Sep 26; 21(19):. PubMed ID: 32993155
    [Abstract] [Full Text] [Related]

  • 34. Comprehensive Assessment of 16S rRNA Gene Amplicon Sequencing for Microbiome Profiling across Multiple Habitats.
    Zhang W, Fan X, Shi H, Li J, Zhang M, Zhao J, Su X.
    Microbiol Spectr; 2023 Jun 15; 11(3):e0056323. PubMed ID: 37102867
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  • 35. Comparison of nine extraction methods for bacterial identification using the ONT MinION sequencer.
    Graham KA, Gomez J, Primm TP, Houston R.
    Int J Legal Med; 2024 Mar 15; 138(2):351-360. PubMed ID: 37775594
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  • 36. Short-read full-length 16S rRNA amplicon sequencing for characterisation of the respiratory bacteriome of captive and free-ranging African elephants (Loxodonta africana).
    Martin LC, O'Hare MA, Ghielmetti G, Twesigomwe D, Kerr TJ, Gumbo R, Buss PE, Kitchin N, Hemmings SMJ, Miller MA, Goosen WJ.
    Sci Rep; 2024 Jun 26; 14(1):14768. PubMed ID: 38926469
    [Abstract] [Full Text] [Related]

  • 37. Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling.
    Fuks G, Elgart M, Amir A, Zeisel A, Turnbaugh PJ, Soen Y, Shental N.
    Microbiome; 2018 Jan 26; 6(1):17. PubMed ID: 29373999
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  • 38. Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing.
    Ong CT, Ross EM, Boe-Hansen GB, Turni C, Hayes BJ, Tabor AE.
    J Anim Sci; 2022 Jan 01; 100(1):. PubMed ID: 34791313
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  • 39. High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution.
    Callahan BJ, Wong J, Heiner C, Oh S, Theriot CM, Gulati AS, McGill SK, Dougherty MK.
    Nucleic Acids Res; 2019 Oct 10; 47(18):e103. PubMed ID: 31269198
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  • 40. Effects of Waterlogging on Soybean Rhizosphere Bacterial Community Using V4, LoopSeq, and PacBio 16S rRNA Sequence.
    Yu T, Cheng L, Liu Q, Wang S, Zhou Y, Zhong H, Tang M, Nian H, Lian T.
    Microbiol Spectr; 2022 Feb 23; 10(1):e0201121. PubMed ID: 35171049
    [Abstract] [Full Text] [Related]

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