These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

269 related items for PubMed ID: 38532317

  • 21. VC@Scale: Scalable and high-performance variant calling on cluster environments.
    Ahmad T, Al Ars Z, Hofstee HP.
    Gigascience; 2021 Sep 07; 10(9):. PubMed ID: 34494101
    [Abstract] [Full Text] [Related]

  • 22. ADS-HCSpark: A scalable HaplotypeCaller leveraging adaptive data segmentation to accelerate variant calling on Spark.
    Xiao A, Wu Z, Dong S.
    BMC Bioinformatics; 2019 Feb 14; 20(1):76. PubMed ID: 30764760
    [Abstract] [Full Text] [Related]

  • 23. NOJAH: NOt Just Another Heatmap for genome-wide cluster analysis.
    Rupji M, Dwivedi B, Kowalski J.
    PLoS One; 2019 Feb 14; 14(3):e0204542. PubMed ID: 30921318
    [Abstract] [Full Text] [Related]

  • 24. NGS_SNPAnalyzer: a desktop software supporting genome projects by identifying and visualizing sequence variations from next-generation sequencing data.
    Lee DJ, Kwon T, Kim CK, Seol YJ, Park DS, Lee TH, Ahn BO.
    Genes Genomics; 2020 Nov 14; 42(11):1311-1317. PubMed ID: 32980993
    [Abstract] [Full Text] [Related]

  • 25. xAtlas: scalable small variant calling across heterogeneous next-generation sequencing experiments.
    Farek J, Hughes D, Salerno W, Zhu Y, Pisupati A, Mansfield A, Krasheninina O, English AC, Metcalf G, Boerwinkle E, Muzny DM, Gibbs R, Khan Z, Sedlazeck FJ.
    Gigascience; 2022 Dec 28; 12():. PubMed ID: 36644891
    [Abstract] [Full Text] [Related]

  • 26. SG-ADVISER mtDNA: a web server for mitochondrial DNA annotation with data from 200 samples of a healthy aging cohort.
    Rueda M, Torkamani A.
    BMC Bioinformatics; 2017 Aug 18; 18(1):373. PubMed ID: 28821228
    [Abstract] [Full Text] [Related]

  • 27.
    ; . PubMed ID:
    [No Abstract] [Full Text] [Related]

  • 28.
    ; . PubMed ID:
    [No Abstract] [Full Text] [Related]

  • 29. Kuura-An automated workflow for analyzing WES and WGS data.
    Jambulingam D, Rathinakannan VS, Heron S, Schleutker J, Fey V.
    PLoS One; 2024 Aug 18; 19(1):e0296785. PubMed ID: 38236904
    [Abstract] [Full Text] [Related]

  • 30. SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package.
    Joo T, Choi JH, Lee JH, Park SE, Jeon Y, Jung SH, Woo HG.
    BMC Bioinformatics; 2019 Feb 20; 20(1):90. PubMed ID: 30786880
    [Abstract] [Full Text] [Related]

  • 31. WEP: a high-performance analysis pipeline for whole-exome data.
    D'Antonio M, D'Onorio De Meo P, Paoletti D, Elmi B, Pallocca M, Sanna N, Picardi E, Pesole G, Castrignanò T.
    BMC Bioinformatics; 2013 Feb 20; 14 Suppl 7(Suppl 7):S11. PubMed ID: 23815231
    [Abstract] [Full Text] [Related]

  • 32. Tracy: basecalling, alignment, assembly and deconvolution of sanger chromatogram trace files.
    Rausch T, Fritz MH, Untergasser A, Benes V.
    BMC Genomics; 2020 Mar 14; 21(1):230. PubMed ID: 32171249
    [Abstract] [Full Text] [Related]

  • 33. Evaluating the Calling Performance of a Rare Disease NGS Panel for Single Nucleotide and Copy Number Variants.
    Cacheiro P, Ordóñez-Ugalde A, Quintáns B, Piñeiro-Hermida S, Amigo J, García-Murias M, Pascual-Pascual SI, Grandas F, Arpa J, Carracedo A, Sobrido MJ.
    Mol Diagn Ther; 2017 Jun 14; 21(3):303-313. PubMed ID: 28290094
    [Abstract] [Full Text] [Related]

  • 34. The COMBAT-TB Workbench: Making Powerful Mycobacterium tuberculosis Bioinformatics Accessible.
    van Heusden P, Mashologu Z, Lose T, Warren R, Christoffels A.
    mSphere; 2022 Feb 23; 7(1):e0099121. PubMed ID: 35138128
    [Abstract] [Full Text] [Related]

  • 35. ProcaryaSV: structural variation detection pipeline for bacterial genomes using short-read sequencing.
    Jugas R, Vitkova H.
    BMC Bioinformatics; 2024 Jul 09; 25(1):233. PubMed ID: 38982375
    [Abstract] [Full Text] [Related]

  • 36. Canvas: versatile and scalable detection of copy number variants.
    Roller E, Ivakhno S, Lee S, Royce T, Tanner S.
    Bioinformatics; 2016 Aug 01; 32(15):2375-7. PubMed ID: 27153601
    [Abstract] [Full Text] [Related]

  • 37. PGen: large-scale genomic variations analysis workflow and browser in SoyKB.
    Liu Y, Khan SM, Wang J, Rynge M, Zhang Y, Zeng S, Chen S, Maldonado Dos Santos JV, Valliyodan B, Calyam PP, Merchant N, Nguyen HT, Xu D, Joshi T.
    BMC Bioinformatics; 2016 Oct 06; 17(Suppl 13):337. PubMed ID: 27766951
    [Abstract] [Full Text] [Related]

  • 38. CloudDOE: a user-friendly tool for deploying Hadoop clouds and analyzing high-throughput sequencing data with MapReduce.
    Chung WC, Chen CC, Ho JM, Lin CY, Hsu WL, Wang YC, Lee DT, Lai F, Huang CW, Chang YJ.
    PLoS One; 2014 Oct 06; 9(6):e98146. PubMed ID: 24897343
    [Abstract] [Full Text] [Related]

  • 39. Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants.
    Garcia M, Juhos S, Larsson M, Olason PI, Martin M, Eisfeldt J, DiLorenzo S, Sandgren J, Díaz De Ståhl T, Ewels P, Wirta V, Nistér M, Käller M, Nystedt B.
    F1000Res; 2020 Oct 06; 9():63. PubMed ID: 32269765
    [Abstract] [Full Text] [Related]

  • 40. SMN1 copy-number and sequence variant analysis from next-generation sequencing data.
    Lopez-Lopez D, Loucera C, Carmona R, Aquino V, Salgado J, Pasalodos S, Miranda M, Alonso Á, Dopazo J.
    Hum Mutat; 2020 Dec 06; 41(12):2073-2077. PubMed ID: 33058415
    [Abstract] [Full Text] [Related]

    Page: [Previous] [Next] [New Search]
    of 14.