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Journal Abstract Search

110 related items for PubMed ID: 39018215

  • 1. Dopcc: Detecting overlapping protein complexes via multi-metrics and co-core attachment method.
    Wang W, Meng X, Xiang J, Bedru HD, Li M.
    IEEE/ACM Trans Comput Biol Bioinform; 2024 Jul 17; PP():. PubMed ID: 39018215
    [Abstract] [Full Text] [Related]

  • 2. DPCMNE: Detecting Protein Complexes From Protein-Protein Interaction Networks Via Multi-Level Network Embedding.
    Meng X, Xiang J, Zheng R, Wu FX, Li M.
    IEEE/ACM Trans Comput Biol Bioinform; 2022 Jul 17; 19(3):1592-1602. PubMed ID: 33417563
    [Abstract] [Full Text] [Related]

  • 3. CACO: A Core-Attachment Method With Cross-Species Functional Ortholog Information to Detect Human Protein Complexes.
    Wang W, Meng X, Xiang J, Shuai Y, Bedru HD, Li M.
    IEEE J Biomed Health Inform; 2023 Sep 17; 27(9):4569-4578. PubMed ID: 37399160
    [Abstract] [Full Text] [Related]

  • 4. Identifying protein complexes based on an edge weight algorithm and core-attachment structure.
    Wang R, Liu G, Wang C.
    BMC Bioinformatics; 2019 Sep 14; 20(1):471. PubMed ID: 31521132
    [Abstract] [Full Text] [Related]

  • 5. Filtering Gene Ontology semantic similarity for identifying protein complexes in large protein interaction networks.
    Wang J, Xie D, Lin H, Yang Z, Zhang Y.
    Proteome Sci; 2012 Jun 21; 10 Suppl 1(Suppl 1):S18. PubMed ID: 22759576
    [Abstract] [Full Text] [Related]

  • 6. An Ensemble Learning Framework for Detecting Protein Complexes From PPI Networks.
    Wang R, Ma H, Wang C.
    Front Genet; 2022 Jun 21; 13():839949. PubMed ID: 35281831
    [Abstract] [Full Text] [Related]

  • 7. DPCT: A Dynamic Method for Detecting Protein Complexes From TAP-Aware Weighted PPI Network.
    SabziNezhad A, Jalili S.
    Front Genet; 2020 Jun 21; 11():567. PubMed ID: 32676097
    [Abstract] [Full Text] [Related]

  • 8. Neighbor Affinity-Based Core-Attachment Method to Detect Protein Complexes in Dynamic PPI Networks.
    Lei X, Liang J.
    Molecules; 2017 Jul 24; 22(7):. PubMed ID: 28737728
    [Abstract] [Full Text] [Related]

  • 9. Detecting overlapping protein complexes in PPI networks based on robustness.
    Wang S, Wu F.
    Proteome Sci; 2013 Nov 07; 11(Suppl 1):S18. PubMed ID: 24565162
    [Abstract] [Full Text] [Related]

  • 10. MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure.
    Srihari S, Ning K, Leong HW.
    BMC Bioinformatics; 2010 Oct 12; 11():504. PubMed ID: 20939868
    [Abstract] [Full Text] [Related]

  • 11. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Oct 12; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
    [Abstract] [Full Text] [Related]

  • 12. Detecting protein complexes with multiple properties by an adaptive harmony search algorithm.
    Wang R, Wang C, Ma H.
    BMC Bioinformatics; 2022 Oct 07; 23(1):414. PubMed ID: 36207692
    [Abstract] [Full Text] [Related]

  • 13. Protein complexes identification based on go attributed network embedding.
    Xu B, Li K, Zheng W, Liu X, Zhang Y, Zhao Z, He Z.
    BMC Bioinformatics; 2018 Dec 20; 19(1):535. PubMed ID: 30572820
    [Abstract] [Full Text] [Related]

  • 14. Spatiotemporal constrained RNA-protein heterogeneous network for protein complex identification.
    Li Z, Wang S, Cui H, Liu X, Zhang Y.
    Brief Bioinform; 2024 May 23; 25(4):. PubMed ID: 38856171
    [Abstract] [Full Text] [Related]

  • 15. Predicting overlapping protein complexes based on core-attachment and a local modularity structure.
    Wang R, Liu G, Wang C, Su L, Sun L.
    BMC Bioinformatics; 2018 Aug 22; 19(1):305. PubMed ID: 30134824
    [Abstract] [Full Text] [Related]

  • 16. Detection of protein complexes from multiple protein interaction networks using graph embedding.
    Liu X, Yang Z, Sang S, Lin H, Wang J, Xu B.
    Artif Intell Med; 2019 May 22; 96():107-115. PubMed ID: 31164203
    [Abstract] [Full Text] [Related]

  • 17. Discovery of protein complexes with core-attachment structures from Tandem Affinity Purification (TAP) data.
    Wu M, Li XL, Kwoh CK, Ng SK, Wong L.
    J Comput Biol; 2012 Sep 22; 19(9):1027-42. PubMed ID: 21777084
    [Abstract] [Full Text] [Related]

  • 18. A Novel Core-Attachment-Based Method to Identify Dynamic Protein Complexes Based on Gene Expression Profiles and PPI Networks.
    Xiao Q, Luo P, Li M, Wang J, Wu FX.
    Proteomics; 2019 Mar 22; 19(5):e1800129. PubMed ID: 30650262
    [Abstract] [Full Text] [Related]

  • 19. Detecting complexes from edge-weighted PPI networks via genes expression analysis.
    Zhang Z, Song J, Tang J, Xu X, Guo F.
    BMC Syst Biol; 2018 Apr 24; 12(Suppl 4):40. PubMed ID: 29745859
    [Abstract] [Full Text] [Related]

  • 20. An Improved Memetic Algorithm for Detecting Protein Complexes in Protein Interaction Networks.
    Wang R, Ma H, Wang C.
    Front Genet; 2021 Apr 24; 12():794354. PubMed ID: 34970305
    [Abstract] [Full Text] [Related]

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