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495 related items for PubMed ID: 7492748

  • 1. Salt effects on polyelectrolyte-ligand binding: comparison of Poisson-Boltzmann, and limiting law/counterion binding models.
    Sharp KA, Friedman RA, Misra V, Hecht J, Honig B.
    Biopolymers; 1995 Aug; 36(2):245-62. PubMed ID: 7492748
    [Abstract] [Full Text] [Related]

  • 2. Salt effects on ligand-DNA binding. Minor groove binding antibiotics.
    Misra VK, Sharp KA, Friedman RA, Honig B.
    J Mol Biol; 1994 Apr 29; 238(2):245-63. PubMed ID: 7512653
    [Abstract] [Full Text] [Related]

  • 3. Thermodynamics of the interactions of lac repressor with variants of the symmetric lac operator: effects of converting a consensus site to a non-specific site.
    Frank DE, Saecker RM, Bond JP, Capp MW, Tsodikov OV, Melcher SE, Levandoski MM, Record MT.
    J Mol Biol; 1997 Apr 18; 267(5):1186-206. PubMed ID: 9150406
    [Abstract] [Full Text] [Related]

  • 4. Entropy and enthalpy of polyelectrolyte complexation: Langevin dynamics simulations.
    Ou Z, Muthukumar M.
    J Chem Phys; 2006 Apr 21; 124(15):154902. PubMed ID: 16674260
    [Abstract] [Full Text] [Related]

  • 5. Salt effects on protein-DNA interactions. The lambda cI repressor and EcoRI endonuclease.
    Misra VK, Hecht JL, Sharp KA, Friedman RA, Honig B.
    J Mol Biol; 1994 Apr 29; 238(2):264-80. PubMed ID: 8158653
    [Abstract] [Full Text] [Related]

  • 6. The salt-dependence of a protein-ligand interaction: ion-protein binding energetics.
    Waldron TT, Schrift GL, Murphy KP.
    J Mol Biol; 2005 Feb 25; 346(3):895-905. PubMed ID: 15713470
    [Abstract] [Full Text] [Related]

  • 7. [Binding of positive charged ligands to DNA. The effect of ionic strength, charge and size of the ligand].
    Sivolob AV, Khrapunov SN.
    Mol Biol (Mosk); 1988 Feb 25; 22(2):414-22. PubMed ID: 3393151
    [Abstract] [Full Text] [Related]

  • 8. Application of the Poisson Boltzmann polyelectrolyte model for analysis of equilibria between single-, double-, and triple-stranded polynucleotides in the presence of K(+), Na(+), and Mg(2+) ions.
    Korolev N, Lyubartsev AP, Nordenskiöld L.
    J Biomol Struct Dyn; 2002 Oct 25; 20(2):275-90. PubMed ID: 12354079
    [Abstract] [Full Text] [Related]

  • 9. Counterion condensation and shape within Poisson-Boltzmann theory.
    Lamm G, Pack GR.
    Biopolymers; 2010 Jul 25; 93(7):619-39. PubMed ID: 20213767
    [Abstract] [Full Text] [Related]

  • 10. Continuum molecular electrostatics, salt effects, and counterion binding--a review of the Poisson-Boltzmann theory and its modifications.
    Grochowski P, Trylska J.
    Biopolymers; 2008 Feb 25; 89(2):93-113. PubMed ID: 17969016
    [Abstract] [Full Text] [Related]

  • 11. Interactions of cationic ligands and proteins with small nucleic acids: analytic treatment of the large coulombic end effect on binding free energy as a function of salt concentration.
    Shkel IA, Ballin JD, Record MT.
    Biochemistry; 2006 Jul 11; 45(27):8411-26. PubMed ID: 16819840
    [Abstract] [Full Text] [Related]

  • 12. Approach to the limit of counterion condensation.
    Fenley MO, Manning GS, Olson WK.
    Biopolymers; 1990 Jul 11; 30(13-14):1191-203. PubMed ID: 2085657
    [Abstract] [Full Text] [Related]

  • 13. Monte Carlo and Poisson-Boltzmann calculations of the fraction of counterions bound to DNA.
    Lamm G, Wong L, Pack GR.
    Biopolymers; 1994 Feb 11; 34(2):227-37. PubMed ID: 8142591
    [Abstract] [Full Text] [Related]

  • 14. Poisson-Boltzmann theory of the charge-induced adsorption of semi-flexible polyelectrolytes.
    Ubbink J, Khokhlov AR.
    J Chem Phys; 2004 Mar 15; 120(11):5353-65. PubMed ID: 15267409
    [Abstract] [Full Text] [Related]

  • 15. Salt-dependent binding of iron(II) mixed-ligand complexes containing 1,10-phenanthroline and dipyrido[3,2-a:2',3'-c]phenazine to calf thymus DNA.
    Mudasir, Wijaya K, Tri Wahyuni E, Yoshioka N, Inoue H.
    Biophys Chem; 2006 Apr 20; 121(1):44-50. PubMed ID: 16442696
    [Abstract] [Full Text] [Related]

  • 16. Density functional study on the structural and thermodynamic properties of aqueous DNA-electrolyte solution in the framework of cell model.
    Wang K, Yu YX, Gao GH.
    J Chem Phys; 2008 May 14; 128(18):185101. PubMed ID: 18532848
    [Abstract] [Full Text] [Related]

  • 17. Sequence specificity, enantiospecificity and polyelectrolyte effect in the binding to DNA of a 6-(2-pyridyl)phenanthridine chiral photonuclease.
    Colmenarejo G, Montero F, Orellana G.
    Anticancer Drug Des; 1997 Jun 14; 12(4):239-60. PubMed ID: 9199658
    [Abstract] [Full Text] [Related]

  • 18. Calorimetric investigation of ethidium and netropsin binding to chicken erythrocyte chromatin.
    Taquet A, Labarbe R, Houssier C.
    Biochemistry; 1998 Jun 23; 37(25):9119-26. PubMed ID: 9636058
    [Abstract] [Full Text] [Related]

  • 19. Solvated interaction energy (SIE) for scoring protein-ligand binding affinities. 1. Exploring the parameter space.
    Naïm M, Bhat S, Rankin KN, Dennis S, Chowdhury SF, Siddiqi I, Drabik P, Sulea T, Bayly CI, Jakalian A, Purisima EO.
    J Chem Inf Model; 2007 Jun 23; 47(1):122-33. PubMed ID: 17238257
    [Abstract] [Full Text] [Related]

  • 20. Dissecting the free energy of drug binding to DNA.
    Chaires JB.
    Anticancer Drug Des; 1996 Dec 23; 11(8):569-80. PubMed ID: 9022746
    [Abstract] [Full Text] [Related]

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