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Journal Abstract Search

137 related items for PubMed ID: 7892173

  • 1. Molecular dynamics simulations of trp apo- and holorepressors: domain structure and ligand-protein interaction.
    Komeiji Y, Uebayasi M, Yamato I.
    Proteins; 1994 Nov; 20(3):248-58. PubMed ID: 7892173
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  • 3. Iron(II) triggered conformational changes in Escherichia coli fur upon DNA binding: a study using molecular modeling.
    Hamed MY, Al-Jabour S.
    J Mol Graph Model; 2006 Oct; 25(2):234-46. PubMed ID: 16443380
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  • 4. Molecular dynamics studies of a DNA-binding protein: 1. A comparison of the trp repressor and trp aporepressor aqueous simulations.
    Howard AE, Kollman PA.
    Protein Sci; 1992 Sep; 1(9):1173-84. PubMed ID: 1304395
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  • 5. Probing the physical basis for trp repressor-operator recognition.
    Grillo AO, Brown MP, Royer CA.
    J Mol Biol; 1999 Apr 02; 287(3):539-54. PubMed ID: 10092458
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  • 6. Conformational and dynamics changes induced by bile acids binding to chicken liver bile acid binding protein.
    Eberini I, Guerini Rocco A, Ientile AR, Baptista AM, Gianazza E, Tomaselli S, Molinari H, Ragona L.
    Proteins; 2008 Jun 02; 71(4):1889-98. PubMed ID: 18175325
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  • 7. Backbone amide dynamics studies of Apo-L75F-TrpR, a temperature-sensitive mutant of the tryptophan repressor protein (TrpR): comparison with the (15)N NMR relaxation profiles of wild-type and A77V mutant Apo-TrpR repressors.
    Goel A, Tripet BP, Tyler RC, Nebert LD, Copié V.
    Biochemistry; 2010 Sep 21; 49(37):8006-19. PubMed ID: 20718459
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  • 10. Mutational analysis of the thermostable arginine repressor from Bacillus stearothermophilus: dissecting residues involved in DNA binding properties.
    Karaivanova IM, Weigel P, Takahashi M, Fort C, Versavaud A, Van Duyne G, Charlier D, Hallet JN, Glansdorff N, Sakanyan V.
    J Mol Biol; 1999 Aug 27; 291(4):843-55. PubMed ID: 10452892
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  • 13. Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box.
    Okamura H, Hanaoka S, Nagadoi A, Makino K, Nishimura Y.
    J Mol Biol; 2000 Feb 04; 295(5):1225-36. PubMed ID: 10653699
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  • 14. AV77 hinge mutation stabilizes the helix-turn-helix domain of trp repressor.
    Gryk MR, Jardetzky O.
    J Mol Biol; 1996 Jan 12; 255(1):204-14. PubMed ID: 8568867
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  • 16. XylS-Pm promoter interactions through two helix-turn-helix motifs: identifying XylS residues important for DNA binding and activation.
    Domínguez-Cuevas P, Marín P, Marqués S, Ramos JL.
    J Mol Biol; 2008 Jan 04; 375(1):59-69. PubMed ID: 18005985
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  • 17. Structure of the Escherichia coli response regulator NarL.
    Baikalov I, Schröder I, Kaczor-Grzeskowiak M, Grzeskowiak K, Gunsalus RP, Dickerson RE.
    Biochemistry; 1996 Aug 27; 35(34):11053-61. PubMed ID: 8780507
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  • 18. Tet repressor induction by tetracycline: a molecular dynamics, continuum electrostatics, and crystallographic study.
    Aleksandrov A, Schuldt L, Hinrichs W, Simonson T.
    J Mol Biol; 2008 May 09; 378(4):898-912. PubMed ID: 18395746
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  • 19. Flexibility of the DNA-binding domains of trp repressor.
    Lawson CL, Zhang RG, Schevitz RW, Otwinowski Z, Joachimiak A, Sigler PB.
    Proteins; 1988 May 09; 3(1):18-31. PubMed ID: 3375234
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  • 20. Combinations of the alpha-helix-turn-alpha-helix motif of TetR with respective residues from LacI or 434Cro: DNA recognition, inducer binding, and urea-dependent denaturation.
    Backes H, Berens C, Helbl V, Walter S, Schmid FX, Hillen W.
    Biochemistry; 1997 May 06; 36(18):5311-22. PubMed ID: 9154913
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