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Journal Abstract Search

70 related items for PubMed ID: 8204220

  • 1. An empirical potential study of the interaction of L-lysine-L-alanine-L-alanine tripeptide with four models of B-DNA with different compositions.
    Vondrásek J, Sponar J, Hobza P.
    J Biomol Struct Dyn; 1994 Feb; 11(4):869-80. PubMed ID: 8204220
    [Abstract] [Full Text] [Related]

  • 2. Synthetic metallopeptides as probes of protein-DNA interactions.
    Long EC, Eason PD, Liang Q.
    Met Ions Biol Syst; 1996 Feb; 33():427-52. PubMed ID: 8742851
    [No Abstract] [Full Text] [Related]

  • 3. A 500 MHz proton NMR study of stacking interactions: binding of tripeptide Lys-Tyr-Lys to tetradeoxynucleotide d-GpCpGpC.
    Barthwal R, Mujeeb A, Kukreti S, Gupta A, Govil G.
    J Mol Recognit; 1991 Feb; 4(2-3):45-52. PubMed ID: 1810346
    [Abstract] [Full Text] [Related]

  • 4. Binding of cationic (+4) alanine- and glycine-containing oligopeptides to double-stranded DNA: thermodynamic analysis of effects of coulombic interactions and alpha-helix induction.
    Padmanabhan S, Zhang W, Capp MW, Anderson CF, Record MT.
    Biochemistry; 1997 Apr 29; 36(17):5193-206. PubMed ID: 9136881
    [Abstract] [Full Text] [Related]

  • 5. Structural aspects of Ca2+ binding by acyclic peptides: low-energy conformational domains and molecular dynamics of N-acetyl-L-prolyl-D-alanyl-L-alanine-N'-methylamide.
    Michel AG, Jeandenans C, Ananthanarayanan VS.
    J Biomol Struct Dyn; 1992 Oct 29; 10(2):281-93. PubMed ID: 1466810
    [Abstract] [Full Text] [Related]

  • 6. The role of lysine 55 in determining the specificity of the purine repressor for its operators through minor groove interactions.
    Glasfeld A, Koehler AN, Schumacher MA, Brennan RG.
    J Mol Biol; 1999 Aug 13; 291(2):347-61. PubMed ID: 10438625
    [Abstract] [Full Text] [Related]

  • 7. Interaction of two peptide-acridine conjugates containing the SPKK peptide motif with DNA and chromatin.
    Flock S, Bailly F, Bailly C, Waring MJ, Hénichart JP, Colson P, Houssier C.
    J Biomol Struct Dyn; 1994 Feb 13; 11(4):881-900. PubMed ID: 8204221
    [Abstract] [Full Text] [Related]

  • 8. Insights into the molecular recognition of the 5'-GNN-3' family of DNA sequences by zinc finger domains.
    Dreier B, Segal DJ, Barbas CF.
    J Mol Biol; 2000 Nov 03; 303(4):489-502. PubMed ID: 11054286
    [Abstract] [Full Text] [Related]

  • 9. Interaction of a bZip oligopeptide model with oligodeoxyribonucleotides modelling DNA binding sites. The effect of flanking sequences.
    Votavová H, Hodanová K, Arnold L, Sponar J.
    J Biomol Struct Dyn; 1997 Dec 03; 15(3):587-96. PubMed ID: 9440004
    [Abstract] [Full Text] [Related]

  • 10. DNA recognition by peptide oligomers.
    Yamane J, Makino K, Morii T, Sugiura Y.
    Nucleic Acids Symp Ser; 1995 Dec 03; (34):143-4. PubMed ID: 8841593
    [Abstract] [Full Text] [Related]

  • 11. Structure, thermodynamics and cooperativity of the glucocorticoid receptor DNA-binding domain in complex with different response elements. Molecular dynamics simulation and free energy perturbation studies.
    Eriksson MA, Nilsson L.
    J Mol Biol; 1995 Oct 27; 253(3):453-72. PubMed ID: 7473727
    [Abstract] [Full Text] [Related]

  • 12. Stabilization of intramolecular triple/single-strand structure by cationic peptides.
    Potaman VN, Sinden RR.
    Biochemistry; 1998 Sep 15; 37(37):12952-61. PubMed ID: 9737875
    [Abstract] [Full Text] [Related]

  • 13. Conformational manifold of alpha-aminoisobutyric acid (Aib) containing alanine-based tripeptides in aqueous solution explored by vibrational spectroscopy, electronic circular dichroism spectroscopy, and molecular dynamics simulations.
    Schweitzer-Stenner R, Gonzales W, Bourne GT, Feng JA, Marshall GR.
    J Am Chem Soc; 2007 Oct 31; 129(43):13095-109. PubMed ID: 17918837
    [Abstract] [Full Text] [Related]

  • 14. Structure-based prediction of DNA target sites by regulatory proteins.
    Kono H, Sarai A.
    Proteins; 1999 Apr 01; 35(1):114-31. PubMed ID: 10090291
    [Abstract] [Full Text] [Related]

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  • 16. Selective recognition of tandemly repeated DNA sequences by homo- and heterodimers of short peptides.
    Aizawa Y, Morii T, Sugiura Y.
    Nucleic Acids Symp Ser; 1997 Apr 01; (37):311-12. PubMed ID: 9586124
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  • 20. Molecular modelling methods for prediction of sequence-selectivity in DNA recognition.
    Wang H, Laughton CA.
    Methods; 2007 Jun 01; 42(2):196-203. PubMed ID: 17472901
    [Abstract] [Full Text] [Related]

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