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138 related items for PubMed ID: 8381492
21. WATGEN: an algorithm for modeling water networks at protein-protein interfaces. Bui HH, Schiewe AJ, Haworth IS. J Comput Chem; 2007 Nov 15; 28(14):2241-51. PubMed ID: 17471455 [Abstract] [Full Text] [Related]
22. A "solvated rotamer" approach to modeling water-mediated hydrogen bonds at protein-protein interfaces. Jiang L, Kuhlman B, Kortemme T, Baker D. Proteins; 2005 Mar 01; 58(4):893-904. PubMed ID: 15651050 [Abstract] [Full Text] [Related]
23. High-density hydration layer of lysozymes: molecular dynamics decomposition of solution scattering data. Merzel F, Smith JC. J Chem Inf Model; 2005 Mar 01; 45(6):1593-9. PubMed ID: 16309259 [Abstract] [Full Text] [Related]
24. Atomic and residue hydrophilicity in the context of folded protein structures. Kuhn LA, Swanson CA, Pique ME, Tainer JA, Getzoff ED. Proteins; 1995 Dec 01; 23(4):536-47. PubMed ID: 8749849 [Abstract] [Full Text] [Related]
25. Prediction of hydration structures around hydrophilic surfaces of proteins by using the empirical hydration distribution functions from a database analysis. Matsuoka D, Nakasako M. J Phys Chem B; 2010 Apr 08; 114(13):4652-63. PubMed ID: 20201497 [Abstract] [Full Text] [Related]
26. Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms. Word JM, Lovell SC, LaBean TH, Taylor HC, Zalis ME, Presley BK, Richardson JS, Richardson DC. J Mol Biol; 1999 Jan 29; 285(4):1711-33. PubMed ID: 9917407 [Abstract] [Full Text] [Related]
27. Unique side chain conformation of a Leu residue in a triple-helical structure. Okuyama K, Narita H, Kawaguchi T, Noguchi K, Tanaka Y, Nishino N. Biopolymers; 2007 Jun 15; 86(3):212-21. PubMed ID: 17373653 [Abstract] [Full Text] [Related]
28. Large-scale networks of hydration water molecules around proteins investigated by cryogenic X-ray crystallography. Nakasako M. Cell Mol Biol (Noisy-le-grand); 2001 Jul 15; 47(5):767-90. PubMed ID: 11728092 [Abstract] [Full Text] [Related]
29. Large-scale networks of hydration water molecules around bovine beta-trypsin revealed by cryogenic X-ray crystal structure analysis. Nakasako M. J Mol Biol; 1999 Jun 11; 289(3):547-64. PubMed ID: 10356328 [Abstract] [Full Text] [Related]
30. Distributions of water around amino acid residues in proteins. Thanki N, Thornton JM, Goodfellow JM. J Mol Biol; 1988 Aug 05; 202(3):637-57. PubMed ID: 3172231 [Abstract] [Full Text] [Related]
31. Inhibition and catalytic mechanism of HIV-1 aspartic protease. Silva AM, Cachau RE, Sham HL, Erickson JW. J Mol Biol; 1996 Jan 19; 255(2):321-46. PubMed ID: 8551523 [Abstract] [Full Text] [Related]
32. Contribution of hydration to protein folding thermodynamics. I. The enthalpy of hydration. Makhatadze GI, Privalov PL. J Mol Biol; 1993 Jul 20; 232(2):639-59. PubMed ID: 8393940 [Abstract] [Full Text] [Related]
33. Solution structure of horse heart ferricytochrome c and detection of redox-related structural changes by high-resolution 1H NMR. Qi PX, Beckman RA, Wand AJ. Biochemistry; 1996 Sep 24; 35(38):12275-86. PubMed ID: 8823161 [Abstract] [Full Text] [Related]
34. Do water molecules mediate protein-DNA recognition? Reddy CK, Das A, Jayaram B. J Mol Biol; 2001 Nov 30; 314(3):619-32. PubMed ID: 11846571 [Abstract] [Full Text] [Related]
35. Accuracy and precision in protein crystal structure analysis: two independent refinements of the structure of poplar plastocyanin at 173 K. Fields BA, Bartsch HH, Bartunik HD, Cordes F, Guss JM, Freeman HC. Acta Crystallogr D Biol Crystallogr; 1994 Sep 01; 50(Pt 5):709-30. PubMed ID: 15299368 [Abstract] [Full Text] [Related]
36. The occurrence of C--H...O hydrogen bonds in alpha-helices and helix termini in globular proteins. Manikandan K, Ramakumar S. Proteins; 2004 Sep 01; 56(4):768-81. PubMed ID: 15281129 [Abstract] [Full Text] [Related]
37. Environment of tryptophan side chains in proteins. Samanta U, Pal D, Chakrabarti P. Proteins; 2000 Feb 15; 38(3):288-300. PubMed ID: 10713989 [Abstract] [Full Text] [Related]
38. Coordination ability of trans-cyclohexane-1,2-diamine-N,N,N',N'-tetrakis(methylenephosphonic acid) towards lanthanide(III) ions. Gałezowska J, Janicki R, Mondry A, Burgada R, Bailly T, Lecouvey M, Kozłowski H. Dalton Trans; 2006 Sep 28; (36):4384-94. PubMed ID: 16967123 [Abstract] [Full Text] [Related]
39. pK(a) Calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin. Spassov VZ, Luecke H, Gerwert K, Bashford D. J Mol Biol; 2001 Sep 07; 312(1):203-19. PubMed ID: 11545597 [Abstract] [Full Text] [Related]
40. Analysis of ligand-bound water molecules in high-resolution crystal structures of protein-ligand complexes. Lu Y, Wang R, Yang CY, Wang S. J Chem Inf Model; 2007 Sep 07; 47(2):668-75. PubMed ID: 17266298 [Abstract] [Full Text] [Related] Page: [Previous] [Next] [New Search]