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Journal Abstract Search

133 related items for PubMed ID: 8429555

  • 1. Accommodating sequence changes in beta-hairpins in proteins.
    Sibanda BL, Thornton JM.
    J Mol Biol; 1993 Jan 20; 229(2):428-47. PubMed ID: 8429555
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  • 2. Beta-hairpins in proteins revisited: lessons for de novo design.
    Gunasekaran K, Ramakrishnan C, Balaram P.
    Protein Eng; 1997 Oct 20; 10(10):1131-41. PubMed ID: 9488138
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  • 3. Conformational interconversions in peptide beta-turns: analysis of turns in proteins and computational estimates of barriers.
    Gunasekaran K, Gomathi L, Ramakrishnan C, Chandrasekhar J, Balaram P.
    J Mol Biol; 1998 Dec 18; 284(5):1505-16. PubMed ID: 9878367
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  • 4. Conformational analysis and clustering of short and medium size loops connecting regular secondary structures: a database for modeling and prediction.
    Donate LE, Rufino SD, Canard LH, Blundell TL.
    Protein Sci; 1996 Dec 18; 5(12):2600-16. PubMed ID: 8976569
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  • 6. Solution structures of a 30-residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.
    Vranken WF, James S, Bennett HP, Ni F.
    Proteins; 2002 Apr 01; 47(1):14-24. PubMed ID: 11870861
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  • 7. Stability of cyclic beta-hairpins: asymmetric contributions from side chains of a hydrogen-bonded cross-strand residue pair.
    Russell SJ, Blandl T, Skelton NJ, Cochran AG.
    J Am Chem Soc; 2003 Jan 15; 125(2):388-95. PubMed ID: 12517150
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  • 8. Free energy determinants of secondary structure formation: III. beta-turns and their role in protein folding.
    Yang AS, Hitz B, Honig B.
    J Mol Biol; 1996 Jun 21; 259(4):873-82. PubMed ID: 8683589
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  • 9. Redesigning the type II' β-turn in green fluorescent protein to type I': implications for folding kinetics and stability.
    Madan B, Sokalingam S, Raghunathan G, Lee SG.
    Proteins; 2014 Oct 21; 82(10):2812-22. PubMed ID: 25044033
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  • 10. HERA--a program to draw schematic diagrams of protein secondary structures.
    Hutchinson EG, Thornton JM.
    Proteins; 1990 Oct 21; 8(3):203-12. PubMed ID: 2281084
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  • 11. Tuning the beta-turn segment in designed peptide beta-hairpins: construction of a stable type I' beta-turn nucleus and hairpin-helix transition promoting segments.
    Rai R, Raghothama S, Sridharan R, Balaram P.
    Biopolymers; 2007 Oct 21; 88(3):350-61. PubMed ID: 17154289
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  • 16. Strand-loop-strand motifs: prediction of hairpins and diverging turns in proteins.
    Kuhn M, Meiler J, Baker D.
    Proteins; 2004 Feb 01; 54(2):282-8. PubMed ID: 14696190
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  • 17. Empirical analysis of protein insertions and deletions determining parameters for the correct placement of gaps in protein sequence alignments.
    Chang MS, Benner SA.
    J Mol Biol; 2004 Aug 06; 341(2):617-31. PubMed ID: 15276848
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  • 18. Statistical and molecular dynamics studies of buried waters in globular proteins.
    Park S, Saven JG.
    Proteins; 2005 Aug 15; 60(3):450-63. PubMed ID: 15937899
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  • 19. Pi-turns in proteins and peptides: Classification, conformation, occurrence, hydration and sequence.
    Rajashankar KR, Ramakumar S.
    Protein Sci; 1996 May 15; 5(5):932-46. PubMed ID: 8732765
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  • 20. Disulfide bonds versus TrpTrp pairs in irregular beta-hairpins: NMR structure of vammin loop 3-derived peptides as a case study.
    Mirassou Y, Santiveri CM, Pérez de Vega MJ, González-Muñiz R, Jiménez MA.
    Chembiochem; 2009 Mar 23; 10(5):902-10. PubMed ID: 19294654
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