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Journal Abstract Search

417 related items for PubMed ID: 8515463

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  • 6. Molecular dynamics simulations of B '-DNA: sequence effects on A-tract-induced bending and flexibility.
    McConnell KJ, Beveridge DL.
    J Mol Biol; 2001 Nov 16; 314(1):23-40. PubMed ID: 11724529
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  • 7. Structure of the B-DNA oligomers d(CGCTAGCG) and d(CGCTCTAGAGCG) in new crystal forms.
    Tereshko V, Urpí L, Malinina L, Huynh-Dinh T, Subirana JA.
    Biochemistry; 1996 Sep 10; 35(36):11589-95. PubMed ID: 8794738
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  • 9. Absence of minor groove monovalent cations in the crosslinked dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
    Chiu TK, Kaczor-Grzeskowiak M, Dickerson RE.
    J Mol Biol; 1999 Sep 24; 292(3):589-608. PubMed ID: 10497024
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  • 10. Molecular dynamics simulations of A. T-rich oligomers: sequence-specific binding of Na+ in the minor groove of B-DNA.
    Mocci F, Saba G.
    Biopolymers; 2003 Apr 24; 68(4):471-85. PubMed ID: 12666173
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  • 11. Atomic-resolution crystal structures of B-DNA reveal specific influences of divalent metal ions on conformation and packing.
    Minasov G, Tereshko V, Egli M.
    J Mol Biol; 1999 Aug 06; 291(1):83-99. PubMed ID: 10438608
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  • 12. The B-DNA dodecamer at high resolution reveals a spine of water on sodium.
    Shui X, McFail-Isom L, Hu GG, Williams LD.
    Biochemistry; 1998 Jun 09; 37(23):8341-55. PubMed ID: 9622486
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  • 13. X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature.
    Shatzky-Schwartz M, Arbuckle ND, Eisenstein M, Rabinovich D, Bareket-Samish A, Haran TE, Luisi BF, Shakked Z.
    J Mol Biol; 1997 Apr 04; 267(3):595-623. PubMed ID: 9126841
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  • 14. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M, Hingerty BE, Luneva N, Amin S, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1996 Jul 30; 35(30):9850-63. PubMed ID: 8703959
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  • 15. Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn.
    Young MA, Beveridge DL.
    J Mol Biol; 1998 Aug 28; 281(4):675-87. PubMed ID: 9710539
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  • 16. Structure of the hydration shells of oligo(dA-dT).oligo(dA-dT) and oligo(dA).oligo(dT) tracts in B-type conformation on the basis of Monte Carlo calculations.
    Eisenhaber F, Tumanyan VG, Abagyan RA.
    Biopolymers; 1990 Aug 28; 30(5-6):563-81. PubMed ID: 2265229
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  • 17. DNA structure: what's in charge?
    McConnell KJ, Beveridge DL.
    J Mol Biol; 2000 Dec 15; 304(5):803-20. PubMed ID: 11124028
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  • 18. Solution structure of an A-tract DNA bend.
    MacDonald D, Herbert K, Zhang X, Pologruto T, Lu P.
    J Mol Biol; 2001 Mar 09; 306(5):1081-98. PubMed ID: 11237619
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  • 19. [Anisotropic flexibility of DNA depends on the base sequence. Conformation calculations of double-stranded tetranucleotides AAAA:TTTT, (AATT)2, (TTAA)2, GGGG:CCCC, (GGCC)2, (CCGG)2].
    Ul'ianov NB, Zhurkin VB.
    Mol Biol (Mosk); 1984 Mar 09; 18(6):1664-85. PubMed ID: 6521743
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  • 20. Crystal and molecular structure of d(CGTAGATCTACG) at 2.25 A resolution.
    Leonard GA, Hunter WN.
    J Mol Biol; 1993 Nov 05; 234(1):198-208. PubMed ID: 8230199
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