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308 related items for PubMed ID: 8639602

  • 1. Structural features of a six-nucleotide RNA hairpin loop found in ribosomal RNA.
    Fountain MA, Serra MJ, Krugh TR, Turner DH.
    Biochemistry; 1996 May 28; 35(21):6539-48. PubMed ID: 8639602
    [Abstract] [Full Text] [Related]

  • 2. Structural characterization of a six-nucleotide RNA hairpin loop found in Escherichia coli, r(UUAAGU).
    Zhang H, Fountain MA, Krugh TR.
    Biochemistry; 2001 Aug 21; 40(33):9879-86. PubMed ID: 11502181
    [Abstract] [Full Text] [Related]

  • 3. Structure of a hexanucleotide RNA hairpin loop conserved in ribosomal RNAs.
    Huang S, Wang YX, Draper DE.
    J Mol Biol; 1996 May 03; 258(2):308-21. PubMed ID: 8627628
    [Abstract] [Full Text] [Related]

  • 4. NMR structure of a bacteriophage T4 RNA hairpin involved in translational repression.
    Mirmira SR, Tinoco I.
    Biochemistry; 1996 Jun 18; 35(24):7664-74. PubMed ID: 8672467
    [Abstract] [Full Text] [Related]

  • 5. Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
    Chen X, McDowell JA, Kierzek R, Krugh TR, Turner DH.
    Biochemistry; 2000 Aug 01; 39(30):8970-82. PubMed ID: 10913310
    [Abstract] [Full Text] [Related]

  • 6. Sequence dependence of the stability of RNA hairpin molecules with six nucleotide loops.
    Vecenie CJ, Morrow CV, Zyra A, Serra MJ.
    Biochemistry; 2006 Feb 07; 45(5):1400-7. PubMed ID: 16445282
    [Abstract] [Full Text] [Related]

  • 7. Hairpin loops consisting of single adenine residues closed by sheared A.A and G.G pairs formed by the DNA triplets AAA and GAG: solution structure of the d(GTACAAAGTAC) hairpin.
    Chou SH, Zhu L, Gao Z, Cheng JW, Reid BR.
    J Mol Biol; 1996 Dec 20; 264(5):981-1001. PubMed ID: 9000625
    [Abstract] [Full Text] [Related]

  • 8. A quadruple mutant T4 RNA hairpin with the same structure as the wild-type translational repressor.
    Mirmira SR, Tinoco I.
    Biochemistry; 1996 Jun 18; 35(24):7675-83. PubMed ID: 8672468
    [Abstract] [Full Text] [Related]

  • 9. Multiple conformations of an intercalated (-)-(7S,8R,9S, 10R)-N6-[10-(7,8,9,10-tetrahydrobenzo[a]pyrenyl)]-2'-deoxyadenosyl adduct in the N-ras codon 61 sequence.
    Zegar IS, Chary P, Jabil RJ, Tamura PJ, Johansen TN, Lloyd RS, Harris CM, Harris TM, Stone MP.
    Biochemistry; 1998 Nov 24; 37(47):16516-28. PubMed ID: 9843418
    [Abstract] [Full Text] [Related]

  • 10. Structural characterization of an N-acetyl-2-aminofluorene (AAF) modified DNA oligomer by NMR, energy minimization, and molecular dynamics.
    O'Handley SF, Sanford DG, Xu R, Lester CC, Hingerty BE, Broyde S, Krugh TR.
    Biochemistry; 1993 Mar 16; 32(10):2481-97. PubMed ID: 8448107
    [Abstract] [Full Text] [Related]

  • 11. Wobble dC.dA pairing 5' to the cationic guanine N7 8,9-dihydro-8-(N7-guanyl)-9-hydroxyaflatoxin B1 adduct: implications for nontargeted AFB1 mutagenesis.
    Giri I, Stone MP.
    Biochemistry; 2003 Jun 17; 42(23):7023-34. PubMed ID: 12795597
    [Abstract] [Full Text] [Related]

  • 12. Solution structure of the conserved 16 S-like ribosomal RNA UGAA tetraloop.
    Butcher SE, Dieckmann T, Feigon J.
    J Mol Biol; 1997 May 02; 268(2):348-58. PubMed ID: 9159475
    [Abstract] [Full Text] [Related]

  • 13. A DNA hairpin with a single residue loop closed by a strongly distorted Watson-Crick G x C base-pair.
    El Amri C, Mauffret O, Monnot M, Tevanian G, Lescot E, Porumb H, Fermandjian S.
    J Mol Biol; 1999 Nov 26; 294(2):427-42. PubMed ID: 10610769
    [Abstract] [Full Text] [Related]

  • 14. Structure model and physicochemical properties of the C-U mismatch pair in the double stranded RNA in solution.
    Tanaka Y, Kojima C, Yamazaki T, Kyogoku Y, Miyashita S, Ono A, Kainosho M.
    Nucleic Acids Symp Ser; 1997 Nov 26; (37):271-2. PubMed ID: 9586104
    [Abstract] [Full Text] [Related]

  • 15. Singly and bifurcated hydrogen-bonded base-pairs in tRNA anticodon hairpins and ribozymes.
    Auffinger P, Westhof E.
    J Mol Biol; 1999 Sep 24; 292(3):467-83. PubMed ID: 10497015
    [Abstract] [Full Text] [Related]

  • 16. Stability of RNA hairpins closed by wobble base pairs.
    Giese MR, Betschart K, Dale T, Riley CK, Rowan C, Sprouse KJ, Serra MJ.
    Biochemistry; 1998 Jan 27; 37(4):1094-100. PubMed ID: 9454601
    [Abstract] [Full Text] [Related]

  • 17. Improved parameters for the prediction of RNA hairpin stability.
    Serra MJ, Barnes TW, Betschart K, Gutierrez MJ, Sprouse KJ, Riley CK, Stewart L, Temel RE.
    Biochemistry; 1997 Apr 22; 36(16):4844-51. PubMed ID: 9125504
    [Abstract] [Full Text] [Related]

  • 18. Adduction of the human N-ras codon 61 sequence with (-)-(7S,8R,9R,10S)-7,8-dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a] pyrene: structural refinement of the intercalated SRSR(61,2) (-)-(7S,8R,9S,10R)-N6-[10-(7,8,9,10- tetrahydrobenzo[a]pyrenyl)]-2'-deoxyadenosyl adduct from 1H NMR.
    Zegar IS, Kim SJ, Johansen TN, Horton PJ, Harris CM, Harris TM, Stone MP.
    Biochemistry; 1996 May 21; 35(20):6212-24. PubMed ID: 8639561
    [Abstract] [Full Text] [Related]

  • 19. NMR reveals the absence of hydrogen bonding in adjacent UU and AG mismatches in an isolated internal loop from ribosomal RNA.
    Shankar N, Xia T, Kennedy SD, Krugh TR, Mathews DH, Turner DH.
    Biochemistry; 2007 Nov 06; 46(44):12665-78. PubMed ID: 17929882
    [Abstract] [Full Text] [Related]

  • 20. On the relative ability of centromeric GNA triplets to form hairpins versus self-paired duplexes.
    Chou SH, Zhu L, Reid BR.
    J Mol Biol; 1996 Jun 14; 259(3):445-57. PubMed ID: 8676380
    [Abstract] [Full Text] [Related]


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