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Journal Abstract Search

439 related items for PubMed ID: 8783394

  • 1. Roles of electrostatic interaction in proteins.
    Nakamura H.
    Q Rev Biophys; 1996 Feb; 29(1):1-90. PubMed ID: 8783394
    [Abstract] [Full Text] [Related]

  • 2. Biophysical investigations on the myb-DNA system.
    Hosur RV, Radha PK, Madan A, Padhy LC.
    Biophys Chem; 1997 Oct; 68(1-3):147-59. PubMed ID: 9468617
    [Abstract] [Full Text] [Related]

  • 3. Protein electrostatics: a review of the equations and methods used to model electrostatic equations in biomolecules--applications in biotechnology.
    Neves-Petersen MT, Petersen SB.
    Biotechnol Annu Rev; 2003 Oct; 9():315-95. PubMed ID: 14650935
    [Abstract] [Full Text] [Related]

  • 4. Contributions of engineered surface salt bridges to the stability of T4 lysozyme determined by directed mutagenesis.
    Sun DP, Sauer U, Nicholson H, Matthews BW.
    Biochemistry; 1991 Jul 23; 30(29):7142-53. PubMed ID: 1854726
    [Abstract] [Full Text] [Related]

  • 5. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins.
    Avbelj F.
    J Mol Biol; 2000 Jul 28; 300(5):1335-59. PubMed ID: 10903873
    [Abstract] [Full Text] [Related]

  • 6. Thermodynamics of specific and non-specific DNA binding by the c-Myb DNA-binding domain.
    Oda M, Furukawa K, Ogata K, Sarai A, Nakamura H.
    J Mol Biol; 1998 Feb 27; 276(3):571-90. PubMed ID: 9551098
    [Abstract] [Full Text] [Related]

  • 7. Statistical and molecular dynamics studies of buried waters in globular proteins.
    Park S, Saven JG.
    Proteins; 2005 Aug 15; 60(3):450-63. PubMed ID: 15937899
    [Abstract] [Full Text] [Related]

  • 8. High-resolution crystal structures of protein helices reconciled with three-centered hydrogen bonds and multipole electrostatics.
    Kuster DJ, Liu C, Fang Z, Ponder JW, Marshall GR.
    PLoS One; 2015 Aug 15; 10(4):e0123146. PubMed ID: 25894612
    [Abstract] [Full Text] [Related]

  • 9. Electrostatic contributions to the stability of halophilic proteins.
    Elcock AH, McCammon JA.
    J Mol Biol; 1998 Jul 24; 280(4):731-48. PubMed ID: 9677300
    [Abstract] [Full Text] [Related]

  • 10. Significant role of electrostatic interactions for stabilization of protein assemblies.
    Takahashi T.
    Adv Biophys; 1997 Jul 24; 34():41-54. PubMed ID: 9204125
    [Abstract] [Full Text] [Related]

  • 11. Evaluation of direct and cooperative contributions towards the strength of buried hydrogen bonds and salt bridges.
    Albeck S, Unger R, Schreiber G.
    J Mol Biol; 2000 May 05; 298(3):503-20. PubMed ID: 10772866
    [Abstract] [Full Text] [Related]

  • 12. Stabilization of protein crystals by electrostatic interactions as revealed by a numerical approach.
    Takahashi T, Endo S, Nagayama K.
    J Mol Biol; 1993 Nov 20; 234(2):421-32. PubMed ID: 7693951
    [Abstract] [Full Text] [Related]

  • 13. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces.
    Ma B, Nussinov R.
    J Mol Biol; 2000 Mar 03; 296(4):1091-104. PubMed ID: 10686106
    [Abstract] [Full Text] [Related]

  • 14. Single-site mutation and secondary structure stability: an isodesmic reaction approach. The case of unnatural amino acid mutagenesis Ala-->Lac.
    Cieplak AS, Sürmeli NB.
    J Org Chem; 2004 May 14; 69(10):3250-61. PubMed ID: 15132529
    [Abstract] [Full Text] [Related]

  • 15. Identification of indispensable residues for specific DNA-binding in the imperfect tandem repeats of c-Myb R2R3.
    Oda M, Furukawa K, Ogata K, Sarai A, Ishii S, Nishimura Y, Nakamura H.
    Protein Eng; 1997 Dec 14; 10(12):1407-14. PubMed ID: 9543002
    [Abstract] [Full Text] [Related]

  • 16. A new force field (ECEPP-05) for peptides, proteins, and organic molecules.
    Arnautova YA, Jagielska A, Scheraga HA.
    J Phys Chem B; 2006 Mar 16; 110(10):5025-44. PubMed ID: 16526746
    [Abstract] [Full Text] [Related]

  • 17. Coulombic interactions between partially charged main-chain atoms not hydrogen-bonded to each other influence the conformations of alpha-helices and antiparallel beta-sheet. A new method for analysing the forces between hydrogen bonding groups in proteins includes all the Coulombic interactions.
    Maccallum PH, Poet R, Milner-White EJ.
    J Mol Biol; 1995 Apr 28; 248(2):361-73. PubMed ID: 7739046
    [Abstract] [Full Text] [Related]

  • 18. Using DelPhi to compute electrostatic potentials and assess their contribution to interactions.
    Oron A, Wolfson H, Gunasekaran K, Nussinov R.
    Curr Protoc Bioinformatics; 2003 Aug 28; Chapter 8():Unit 8.4. PubMed ID: 18428711
    [Abstract] [Full Text] [Related]

  • 19. On the orientation of the backbone dipoles in native folds.
    Ripoll DR, Vila JA, Scheraga HA.
    Proc Natl Acad Sci U S A; 2005 May 24; 102(21):7559-64. PubMed ID: 15894608
    [Abstract] [Full Text] [Related]

  • 20. Some practical approaches to treating electrostatic polarization of proteins.
    Ji C, Mei Y.
    Acc Chem Res; 2014 Sep 16; 47(9):2795-803. PubMed ID: 24883956
    [Abstract] [Full Text] [Related]

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