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676 related items for PubMed ID: 8873598

  • 1. NMR solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite thymidine: comparison with the duplex containing deoxyadenosine opposite the adduct.
    Cullinan D, Korobka A, Grollman AP, Patel DJ, Eisenberg M, de los Santos C.
    Biochemistry; 1996 Oct 15; 35(41):13319-27. PubMed ID: 8873598
    [Abstract] [Full Text] [Related]

  • 2. Solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyadenosine, determined by NMR spectroscopy and restrained molecular dynamics.
    Korobka A, Cullinan D, Cosman M, Grollman AP, Patel DJ, Eisenberg M, de los Santos C.
    Biochemistry; 1996 Oct 15; 35(41):13310-8. PubMed ID: 8873597
    [Abstract] [Full Text] [Related]

  • 3. Solution structure of a DNA duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyguanosine.
    Cullinan D, Johnson F, Grollman AP, Eisenberg M, de los Santos C.
    Biochemistry; 1997 Sep 30; 36(39):11933-43. PubMed ID: 9305987
    [Abstract] [Full Text] [Related]

  • 4. Solution structure of an 11-mer duplex containing the 3, N(4)-ethenocytosine adduct opposite 2'-deoxycytidine: implications for the recognition of exocyclic lesions by DNA glycosylases.
    Cullinan D, Johnson F, de los Santos C.
    J Mol Biol; 2000 Feb 25; 296(3):851-61. PubMed ID: 10677286
    [Abstract] [Full Text] [Related]

  • 5. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M, Hingerty BE, Luneva N, Amin S, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1996 Jul 30; 35(30):9850-63. PubMed ID: 8703959
    [Abstract] [Full Text] [Related]

  • 6. Solution structure of the aminofluorene [AF]-intercalated conformer of the syn-[AF]-C8-dG adduct opposite dC in a DNA duplex.
    Mao B, Hingerty BE, Broyde S, Patel DJ.
    Biochemistry; 1998 Jan 06; 37(1):81-94. PubMed ID: 9425028
    [Abstract] [Full Text] [Related]

  • 7. Crystallographic characterization of an exocyclic DNA adduct: 3,N4-etheno-2'-deoxycytidine in the dodecamer 5'-CGCGAATTepsilonCGCG-3'.
    Freisinger E, Fernandes A, Grollman AP, Kisker C.
    J Mol Biol; 2003 Jun 13; 329(4):685-97. PubMed ID: 12787670
    [Abstract] [Full Text] [Related]

  • 8. Solution structure of the aminofluorene [AF]-external conformer of the anti-[AF]-C8-dG adduct opposite dC in a DNA duplex.
    Mao B, Hingerty BE, Broyde S, Patel DJ.
    Biochemistry; 1998 Jan 06; 37(1):95-106. PubMed ID: 9425029
    [Abstract] [Full Text] [Related]

  • 9. Solution conformation of the (-)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Feng B, Gorin A, Kolbanovskiy A, Hingerty BE, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1997 Nov 11; 36(45):13780-90. PubMed ID: 9374854
    [Abstract] [Full Text] [Related]

  • 10. NMR studies of the exocyclic 1,N6-ethenodeoxyadenosine adduct (epsilon dA) opposite thymidine in a DNA duplex. Nonplanar alignment of epsilon dA(anti) and dT(anti) at the lesion site.
    Kouchakdjian M, Eisenberg M, Yarema K, Basu A, Essigmann J, Patel DJ.
    Biochemistry; 1991 Feb 19; 30(7):1820-8. PubMed ID: 1993196
    [Abstract] [Full Text] [Related]

  • 11. Solution structure of the aminofluorene-intercalated conformer of the syn [AF]-C8-dG adduct opposite a--2 deletion site in the NarI hot spot sequence context.
    Mao B, Gorin A, Gu Z, Hingerty BE, Broyde S, Patel DJ.
    Biochemistry; 1997 Nov 25; 36(47):14479-90. PubMed ID: 9398167
    [Abstract] [Full Text] [Related]

  • 12. Structural alignment of the (+)-trans-anti-benzo[a]pyrene-dG adduct positioned opposite dC at a DNA template-primer junction.
    Feng B, Gorin A, Hingerty BE, Geacintov NE, Broyde S, Patel DJ.
    Biochemistry; 1997 Nov 11; 36(45):13769-79. PubMed ID: 9374853
    [Abstract] [Full Text] [Related]

  • 13. NMR solution structure of a nonanucleotide duplex with a dG mismatch opposite a 10S adduct derived from trans addition of a deoxyadenosine N6-amino group to (+)-(7R,8S,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10- tetrahydrobenzo[a]pyrene: an unusual syn glycosidic torsion angle at the modified dA.
    Yeh HJ, Sayer JM, Liu X, Altieri AS, Byrd RA, Lakshman MK, Yagi H, Schurter EJ, Gorenstein DG, Jerina DM.
    Biochemistry; 1995 Oct 17; 34(41):13570-81. PubMed ID: 7577946
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  • 16. Solution structure of the d(T-C-G-A) duplex at acidic pH. A parallel-stranded helix containing C+ .C, G.G and A.A pairs.
    Wang Y, Patel DJ.
    J Mol Biol; 1994 Sep 30; 242(4):508-26. PubMed ID: 7932707
    [Abstract] [Full Text] [Related]

  • 17. Solution structure of the calicheamicin gamma 1I-DNA complex.
    Kumar RA, Ikemoto N, Patel DJ.
    J Mol Biol; 1997 Jan 17; 265(2):187-201. PubMed ID: 9020982
    [Abstract] [Full Text] [Related]

  • 18. Solution structural study of a DNA duplex containing the guanine-N7 adduct formed by a cytotoxic platinum-acridine hybrid agent.
    Baruah H, Wright MW, Bierbach U.
    Biochemistry; 2005 Apr 26; 44(16):6059-70. PubMed ID: 15835895
    [Abstract] [Full Text] [Related]

  • 19. Solution structure of a cis-opened (10R)-N6-deoxyadenosine adduct of (9S,10R)-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA duplex.
    Volk DE, Thiviyanathan V, Rice JS, Luxon BA, Shah JH, Yagi H, Sayer JM, Yeh HJ, Jerina DM, Gorenstein DG.
    Biochemistry; 2003 Feb 18; 42(6):1410-20. PubMed ID: 12578353
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