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149 related items for PubMed ID: 9062117

  • 21. Theoretical modeling of the O-intermediate structure of bacteriorhodopsin.
    Watanabe HC, Ishikura T, Yamato T.
    Proteins; 2009 Apr; 75(1):53-61. PubMed ID: 18767148
    [Abstract] [Full Text] [Related]

  • 22. Molecular dynamics study of the proton pump cycle of bacteriorhodopsin.
    Zhou F, Windemuth A, Schulten K.
    Biochemistry; 1993 Mar 09; 32(9):2291-306. PubMed ID: 8443172
    [Abstract] [Full Text] [Related]

  • 23. Structural alterations for proton translocation in the M state of wild-type bacteriorhodopsin.
    Sass HJ, Büldt G, Gessenich R, Hehn D, Neff D, Schlesinger R, Berendzen J, Ormos P.
    Nature; 2000 Aug 10; 406(6796):649-53. PubMed ID: 10949308
    [Abstract] [Full Text] [Related]

  • 24. Key role of electrostatic interactions in bacteriorhodopsin proton transfer.
    Bondar AN, Fischer S, Smith JC, Elstner M, Suhai S.
    J Am Chem Soc; 2004 Nov 10; 126(44):14668-77. PubMed ID: 15521787
    [Abstract] [Full Text] [Related]

  • 25. Molecular dynamics study of the M412 intermediate of bacteriorhodopsin.
    Xu D, Sheves M, Schulten K.
    Biophys J; 1995 Dec 10; 69(6):2745-60. PubMed ID: 8599681
    [Abstract] [Full Text] [Related]

  • 26. X-ray diffraction of bacteriorhodopsin photocycle intermediates.
    Lanyi JK.
    Mol Membr Biol; 2004 Dec 10; 21(3):143-50. PubMed ID: 15204622
    [Abstract] [Full Text] [Related]

  • 27. The final stages of folding of the membrane protein bacteriorhodopsin occur by kinetically indistinguishable parallel folding paths that are mediated by pH.
    Lu H, Booth PJ.
    J Mol Biol; 2000 May 26; 299(1):233-43. PubMed ID: 10860735
    [Abstract] [Full Text] [Related]

  • 28. pK(a) Calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin.
    Spassov VZ, Luecke H, Gerwert K, Bashford D.
    J Mol Biol; 2001 Sep 07; 312(1):203-19. PubMed ID: 11545597
    [Abstract] [Full Text] [Related]

  • 29. Tuning of retinal twisting in bacteriorhodopsin controls the directionality of the early photocycle steps.
    Bondar AN, Fischer S, Suhai S, Smith JC.
    J Phys Chem B; 2005 Aug 11; 109(31):14786-8. PubMed ID: 16852870
    [Abstract] [Full Text] [Related]

  • 30. Water dynamics simulation as a tool for probing proton transfer pathways in a heptahelical membrane protein.
    Kandt C, Gerwert K, Schlitter J.
    Proteins; 2005 Feb 15; 58(3):528-37. PubMed ID: 15609339
    [Abstract] [Full Text] [Related]

  • 31. Determination of retinal chromophore structure in bacteriorhodopsin with resonance Raman spectroscopy.
    Smith SO, Lugtenburg J, Mathies RA.
    J Membr Biol; 1985 Feb 15; 85(2):95-109. PubMed ID: 4009698
    [Abstract] [Full Text] [Related]

  • 32. Structural changes during the formation of early intermediates in the bacteriorhodopsin photocycle.
    Hayashi S, Tajkhorshid E, Schulten K.
    Biophys J; 2002 Sep 15; 83(3):1281-97. PubMed ID: 12202355
    [Abstract] [Full Text] [Related]

  • 33. Structural changes in bacteriorhodopsin following retinal photoisomerization from the 13-cis form.
    Mizuide N, Shibata M, Friedman N, Sheves M, Belenky M, Herzfeld J, Kandori H.
    Biochemistry; 2006 Sep 05; 45(35):10674-81. PubMed ID: 16939219
    [Abstract] [Full Text] [Related]

  • 34. Mechanism of proton transport in bacteriorhodopsin from crystallographic structures of the K, L, M1, M2, and M2' intermediates of the photocycle.
    Lanyi JK, Schobert B.
    J Mol Biol; 2003 Apr 25; 328(2):439-50. PubMed ID: 12691752
    [Abstract] [Full Text] [Related]

  • 35. Key role of active-site water molecules in bacteriorhodopsin proton-transfer reactions.
    Bondar AN, Baudry J, Suhai S, Fischer S, Smith JC.
    J Phys Chem B; 2008 Nov 27; 112(47):14729-41. PubMed ID: 18973373
    [Abstract] [Full Text] [Related]

  • 36. An energy-based approach to packing the 7-helix bundle of bacteriorhodopsin.
    Chou KC, Carlacci L, Maggiora GM, Parodi LA, Schulz MW.
    Protein Sci; 1992 Jun 27; 1(6):810-27. PubMed ID: 1304922
    [Abstract] [Full Text] [Related]

  • 37. Computational studies of the early intermediates of the bacteriorhodopsin photocycle.
    Engels M, Gerwert K, Bashford D.
    Biophys Chem; 1995 Jun 27; 56(1-2):95-104. PubMed ID: 7662874
    [Abstract] [Full Text] [Related]

  • 38. Understanding structure and function in the light-driven proton pump bacteriorhodopsin.
    Lanyi JK.
    J Struct Biol; 1998 Dec 15; 124(2-3):164-78. PubMed ID: 10049804
    [Abstract] [Full Text] [Related]

  • 39. Relocation of water molecules between the Schiff base and the Thr46-Asp96 region during light-driven unidirectional proton transport by bacteriorhodopsin: an FTIR study of the N intermediate.
    Maeda A, Gennis RB, Balashov SP, Ebrey TG.
    Biochemistry; 2005 Apr 26; 44(16):5960-8. PubMed ID: 15835885
    [Abstract] [Full Text] [Related]

  • 40. Suppression of the back proton-transfer from Asp85 to the retinal Schiff base in bacteriorhodopsin: a theoretical analysis of structural elements.
    Bondar AN, Suhai S, Fischer S, Smith JC, Elstner M.
    J Struct Biol; 2007 Mar 26; 157(3):454-69. PubMed ID: 17189704
    [Abstract] [Full Text] [Related]

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