These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

195 related items for PubMed ID: 9325101

  • 1. Kinetics of peptide folding: computer simulations of SYPFDV and peptide variants in water.
    Mohanty D, Elber R, Thirumalai D, Beglov D, Roux B.
    J Mol Biol; 1997 Sep 26; 272(3):423-42. PubMed ID: 9325101
    [Abstract] [Full Text] [Related]

  • 2. Dissecting the stability of a beta-hairpin peptide that folds in water: NMR and molecular dynamics analysis of the beta-turn and beta-strand contributions to folding.
    Griffiths-Jones SR, Maynard AJ, Searle MS.
    J Mol Biol; 1999 Oct 08; 292(5):1051-69. PubMed ID: 10512702
    [Abstract] [Full Text] [Related]

  • 3. Molecular dynamics simulations of peptides and proteins with a continuum electrostatic model based on screened Coulomb potentials.
    Hassan SA, Mehler EL, Zhang D, Weinstein H.
    Proteins; 2003 Apr 01; 51(1):109-25. PubMed ID: 12596268
    [Abstract] [Full Text] [Related]

  • 4. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces.
    Ma B, Nussinov R.
    J Mol Biol; 2000 Mar 03; 296(4):1091-104. PubMed ID: 10686106
    [Abstract] [Full Text] [Related]

  • 5. Free energy landscape of protein folding in water: explicit vs. implicit solvent.
    Zhou R.
    Proteins; 2003 Nov 01; 53(2):148-61. PubMed ID: 14517967
    [Abstract] [Full Text] [Related]

  • 6. On the pH-conformational dependence of the unblocked SYPYD peptide.
    Ripoll DR, Vila JA, Villegas ME, Scheraga HA.
    J Mol Biol; 1999 Sep 17; 292(2):431-40. PubMed ID: 10493886
    [Abstract] [Full Text] [Related]

  • 7. Folding simulations of Trp-cage mini protein in explicit solvent using biasing potential replica-exchange molecular dynamics simulations.
    Kannan S, Zacharias M.
    Proteins; 2009 Aug 01; 76(2):448-60. PubMed ID: 19173315
    [Abstract] [Full Text] [Related]

  • 8. Protein refolding versus aggregation: computer simulations on an intermediate-resolution protein model.
    Smith AV, Hall CK.
    J Mol Biol; 2001 Sep 07; 312(1):187-202. PubMed ID: 11545596
    [Abstract] [Full Text] [Related]

  • 9. Thermodynamics of a reverse turn motif. Solvent effects and side-chain packing.
    Demchuk E, Bashford D, Gippert GP, Case DA.
    J Mol Biol; 1997 Jul 11; 270(2):305-17. PubMed ID: 9236131
    [Abstract] [Full Text] [Related]

  • 10. Local control of peptide conformation: stabilization of cis proline peptide bonds by aromatic proline interactions.
    Wu WJ, Raleigh DP.
    Biopolymers; 1998 Apr 11; 45(5):381-94. PubMed ID: 9530015
    [Abstract] [Full Text] [Related]

  • 11. Tryptophan rich peptides: influence of indole rings on backbone conformation.
    Mahalakshmi R, Sengupta A, Raghothama S, Shamala N, Balaram P.
    Biopolymers; 2007 Apr 11; 88(1):36-54. PubMed ID: 17091496
    [Abstract] [Full Text] [Related]

  • 12. Dynamics of a type VI reverse turn in a linear peptide in aqueous solution.
    Demchuk E, Bashford D, Case DA.
    Fold Des; 1997 Apr 11; 2(1):35-46. PubMed ID: 9080197
    [Abstract] [Full Text] [Related]

  • 13. Early events in the folding of an amphipathic peptide: A multinanosecond molecular dynamics study.
    Chipot C, Maigret B, Pohorille A.
    Proteins; 1999 Sep 01; 36(4):383-99. PubMed ID: 10450080
    [Abstract] [Full Text] [Related]

  • 14. Reproducible polypeptide folding and structure prediction using molecular dynamics simulations.
    Seibert MM, Patriksson A, Hess B, van der Spoel D.
    J Mol Biol; 2005 Nov 18; 354(1):173-83. PubMed ID: 16236315
    [Abstract] [Full Text] [Related]

  • 15. Molecular dynamics simulation of folding of a short helical peptide with many charged residues.
    Wei CC, Ho MH, Wang WH, Sun YC.
    J Phys Chem B; 2005 Oct 27; 109(42):19980-6. PubMed ID: 16853583
    [Abstract] [Full Text] [Related]

  • 16. Rapid boundary element solvation electrostatics calculations in folding simulations: successful folding of a 23-residue peptide.
    Totrov M, Abagyan R.
    Biopolymers; 2001 Oct 27; 60(2):124-33. PubMed ID: 11455546
    [Abstract] [Full Text] [Related]

  • 17. Beta-hairpin folding by a model amyloid peptide in solution and at an interface.
    Knecht V.
    J Phys Chem B; 2008 Aug 07; 112(31):9476-83. PubMed ID: 18593146
    [Abstract] [Full Text] [Related]

  • 18. The folding mechanism of collagen-like model peptides explored through detailed molecular simulations.
    Stultz CM.
    Protein Sci; 2006 Sep 07; 15(9):2166-77. PubMed ID: 16943446
    [Abstract] [Full Text] [Related]

  • 19. Cooperative folding mechanism of a beta-hairpin peptide studied by a multicanonical replica-exchange molecular dynamics simulation.
    Yoda T, Sugita Y, Okamoto Y.
    Proteins; 2007 Mar 01; 66(4):846-59. PubMed ID: 17173285
    [Abstract] [Full Text] [Related]

  • 20.
    ; . PubMed ID:
    [No Abstract] [Full Text] [Related]

    Page: [Next] [New Search]
    of 10.