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317 related items for PubMed ID: 9376359

  • 1. Minor groove-directed and intercalative ligand-DNA interactions in the poisoning of human DNA topoisomerase I by protoberberine analogs.
    Pilch DS, Yu C, Makhey D, LaVoie EJ, Srinivasan AR, Olson WK, Sauers RR, Breslauer KJ, Geacintov NE, Liu LF.
    Biochemistry; 1997 Oct 14; 36(41):12542-53. PubMed ID: 9376359
    [Abstract] [Full Text] [Related]

  • 2. DNA minor groove binding-directed poisoning of human DNA topoisomerase I by terbenzimidazoles.
    Xu Z, Li TK, Kim JS, LaVoie EJ, Breslauer KJ, Liu LF, Pilch DS.
    Biochemistry; 1998 Mar 10; 37(10):3558-66. PubMed ID: 9521677
    [Abstract] [Full Text] [Related]

  • 3. Human topoisomerase I poisoning by protoberberines: potential roles for both drug-DNA and drug-enzyme interactions.
    Li TK, Bathory E, LaVoie EJ, Srinivasan AR, Olson WK, Sauers RR, Liu LF, Pilch DS.
    Biochemistry; 2000 Jun 20; 39(24):7107-16. PubMed ID: 10852708
    [Abstract] [Full Text] [Related]

  • 4. Solution structure of the calicheamicin gamma 1I-DNA complex.
    Kumar RA, Ikemoto N, Patel DJ.
    J Mol Biol; 1997 Jan 17; 265(2):187-201. PubMed ID: 9020982
    [Abstract] [Full Text] [Related]

  • 5. Berenil [1,3-bis(4'-amidinophenyl)triazene] binding to DNA duplexes and to a RNA duplex: evidence for both intercalative and minor groove binding properties.
    Pilch DS, Kirolos MA, Liu X, Plum GE, Breslauer KJ.
    Biochemistry; 1995 Aug 08; 34(31):9962-76. PubMed ID: 7632695
    [Abstract] [Full Text] [Related]

  • 6. Aminoglycoside binding in the major groove of duplex RNA: the thermodynamic and electrostatic forces that govern recognition.
    Jin E, Katritch V, Olson WK, Kharatisvili M, Abagyan R, Pilch DS.
    J Mol Biol; 2000 Apr 21; 298(1):95-110. PubMed ID: 10756107
    [Abstract] [Full Text] [Related]

  • 7. Induction of topoisomerase II-mediated DNA cleavage by a protoberberine alkaloid, berberrubine.
    Kim SA, Kwon Y, Kim JH, Muller MT, Chung IK.
    Biochemistry; 1998 Nov 17; 37(46):16316-24. PubMed ID: 9819224
    [Abstract] [Full Text] [Related]

  • 8. Characterizing the DNA binding modes of a topoisomerase I-poisoning terbenzimidazole: evidence for both intercalative and minor groove binding properties.
    Pilch DS, Xu Z, Sun Q, Lavoie EJ, Liu LF, Geacintov NE, Breslauer KJ.
    Drug Des Discov; 1996 Apr 17; 13(3-4):115-33. PubMed ID: 8874049
    [Abstract] [Full Text] [Related]

  • 9. The interaction of intercalators and groove-binding agents with DNA triple-helical structures: the influence of ligand structure, DNA backbone modifications and sequence.
    Wilson WD, Mizan S, Tanious FA, Yao S, Zon G.
    J Mol Recognit; 1994 Jun 17; 7(2):89-98. PubMed ID: 7826678
    [Abstract] [Full Text] [Related]

  • 10. Spectrometric studies of cytotoxic protoberberine alkaloids binding to double-stranded DNA.
    Chen WH, Qin Y, Cai Z, Chan CL, Luo GA, Jiang ZH.
    Bioorg Med Chem; 2005 Mar 01; 13(5):1859-66. PubMed ID: 15698803
    [Abstract] [Full Text] [Related]

  • 11. A terbenzimidazole that preferentially binds and conformationally alters structurally distinct DNA duplex domains: a potential mechanism for topoisomerase I poisoning.
    Pilch DS, Xu Z, Sun Q, LaVoie EJ, Liu LF, Breslauer KJ.
    Proc Natl Acad Sci U S A; 1997 Dec 09; 94(25):13565-70. PubMed ID: 9391066
    [Abstract] [Full Text] [Related]

  • 12. Interactions of intercalative and minor groove binding ligands with triplex poly(dA).[poly(dT)]2 and with duplex poly(dA).poly(dT) and poly[d(A-T)]2 studied by CD, LD, and normal absorption.
    Kim HK, Kim JM, Kim SK, Rodger A, Nordén B.
    Biochemistry; 1996 Jan 30; 35(4):1187-94. PubMed ID: 8573573
    [Abstract] [Full Text] [Related]

  • 13. The hydration of nucleic acid duplexes as assessed by a combination of volumetric and structural techniques.
    Chalikian TV, Völker J, Srinivasan AR, Olson WK, Breslauer KJ.
    Biopolymers; 1999 Oct 15; 50(5):459-71. PubMed ID: 10479730
    [Abstract] [Full Text] [Related]

  • 14. Differential poisoning of topoisomerases by menogaril and nogalamycin dictated by the minor groove-binding nogalose sugar.
    Sim SP, Gatto B, Yu C, Liu AA, Li TK, Pilch DS, LaVoie EJ, Liu LF.
    Biochemistry; 1997 Oct 28; 36(43):13285-91. PubMed ID: 9341219
    [Abstract] [Full Text] [Related]

  • 15. RNA-binding potential of protoberberine alkaloids: spectroscopic and calorimetric studies on the binding of berberine, palmatine, and coralyne to protonated RNA structures.
    Islam MM, Suresh Kumar G.
    DNA Cell Biol; 2009 Dec 28; 28(12):637-50. PubMed ID: 19715476
    [Abstract] [Full Text] [Related]

  • 16. Spectroscopic and calorimetric studies on the binding of alkaloids berberine, palmatine and coralyne to double stranded RNA polynucleotides.
    Islam MM, Chowdhury SR, Kumar GS.
    J Phys Chem B; 2009 Jan 29; 113(4):1210-24. PubMed ID: 19132839
    [Abstract] [Full Text] [Related]

  • 17. The 9-position in berberine analogs is an important determinant of DNA topoisomerase II inhibition.
    Krishnan P, Bastow KF.
    Anticancer Drug Des; 2000 Aug 29; 15(4):255-64. PubMed ID: 11200501
    [Abstract] [Full Text] [Related]

  • 18. [Interaction of topotecan, DNA topoisomerase I inhibitor, with double-stranded polydeoxyribonucleotides. III. Binding at the minor groove].
    Strel'tsov SA, Mikheĭkin AL, Grokhovskiĭ SL, Oleĭnikov VA, Zhuze AL.
    Mol Biol (Mosk); 2002 Aug 29; 36(3):511-24. PubMed ID: 12068638
    [Abstract] [Full Text] [Related]

  • 19. Spectroscopic studies of 9-hydroxyellipticine binding to DNA.
    Ismail MA, Sanders KJ, Fennell GC, Latham HC, Wormell P, Rodger A.
    Biopolymers; 1998 Sep 29; 46(3):127-43. PubMed ID: 9741963
    [Abstract] [Full Text] [Related]

  • 20. Interaction of isoquinoline alkaloids with an RNA triplex: structural and thermodynamic studies of berberine, palmatine, and coralyne binding to poly(U).poly(A)(*)poly(U).
    Sinha R, Kumar GS.
    J Phys Chem B; 2009 Oct 08; 113(40):13410-20. PubMed ID: 19754095
    [Abstract] [Full Text] [Related]

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