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Journal Abstract Search

422 related items for PubMed ID: 9414214

  • 1. Analysis of the stability of looped-out and stacked-in conformations of an adenine bulge in DNA using a continuum model for solvent and ions.
    Zacharias M, Sklenar H.
    Biophys J; 1997 Dec; 73(6):2990-3003. PubMed ID: 9414214
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  • 2. Conformational analysis of single-base bulges in A-form DNA and RNA using a hierarchical approach and energetic evaluation with a continuum solvent model.
    Zacharias M, Sklenar H.
    J Mol Biol; 1999 Jun 04; 289(2):261-75. PubMed ID: 10366504
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  • 3. Conformational transitions in RNA single uridine and adenosine bulge structures: a molecular dynamics free energy simulation study.
    Barthel A, Zacharias M.
    Biophys J; 2006 Apr 01; 90(7):2450-62. PubMed ID: 16399833
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  • 5. Solution structure of a five-adenine bulge loop within a DNA duplex.
    Dornberger U, Hillisch A, Gollmick FA, Fritzsche H, Diekmann S.
    Biochemistry; 1999 Sep 28; 38(39):12860-8. PubMed ID: 10504256
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  • 10. Molecular dynamics and continuum solvent studies of the stability of polyG-polyC and polyA-polyT DNA duplexes in solution.
    Cheatham TE, Srinivasan J, Case DA, Kollman PA.
    J Biomol Struct Dyn; 1998 Oct 28; 16(2):265-80. PubMed ID: 9833666
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  • 12. A free energy analysis of nucleic acid base stacking in aqueous solution.
    Friedman RA, Honig B.
    Biophys J; 1995 Oct 28; 69(4):1528-35. PubMed ID: 8534823
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  • 18. Continuum solvent studies of the stability of RNA hairpin loops and helices.
    Srinivasan J, Miller J, Kollman PA, Case DA.
    J Biomol Struct Dyn; 1998 Dec 28; 16(3):671-82. PubMed ID: 10052623
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  • 20. Three-dimensional structures of bulge-containing DNA fragments.
    Joshua-Tor L, Frolow F, Appella E, Hope H, Rabinovich D, Sussman JL.
    J Mol Biol; 1992 May 20; 225(2):397-431. PubMed ID: 1593627
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