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Journal Abstract Search

200 related items for PubMed ID: 9427765

  • 1. Dynamic modes of the flipped-out cytosine during HhaI methyltransferase-DNA interactions in solution.
    Klimasauskas S, Szyperski T, Serva S, Wüthrich K.
    EMBO J; 1998 Jan 02; 17(1):317-24. PubMed ID: 9427765
    [Abstract] [Full Text] [Related]

  • 2. Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase.
    Horton JR, Ratner G, Banavali NK, Huang N, Choi Y, Maier MA, Marquez VE, MacKerell AD, Cheng X.
    Nucleic Acids Res; 2004 Jan 02; 32(13):3877-86. PubMed ID: 15273274
    [Abstract] [Full Text] [Related]

  • 3. Protein-facilitated base flipping in DNA by cytosine-5-methyltransferase.
    Huang N, Banavali NK, MacKerell AD.
    Proc Natl Acad Sci U S A; 2003 Jan 07; 100(1):68-73. PubMed ID: 12506195
    [Abstract] [Full Text] [Related]

  • 4. Engineered extrahelical base destabilization enhances sequence discrimination of DNA methyltransferase M.HhaI.
    Youngblood B, Shieh FK, De Los Rios S, Perona JJ, Reich NO.
    J Mol Biol; 2006 Sep 15; 362(2):334-46. PubMed ID: 16919299
    [Abstract] [Full Text] [Related]

  • 5. Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine.
    Sheikhnejad G, Brank A, Christman JK, Goddard A, Alvarez E, Ford H, Marquez VE, Marasco CJ, Sufrin JR, O'gara M, Cheng X.
    J Mol Biol; 1999 Feb 05; 285(5):2021-34. PubMed ID: 9925782
    [Abstract] [Full Text] [Related]

  • 6. The role of Arg165 towards base flipping, base stabilization and catalysis in M.HhaI.
    Shieh FK, Youngblood B, Reich NO.
    J Mol Biol; 2006 Sep 22; 362(3):516-27. PubMed ID: 16926025
    [Abstract] [Full Text] [Related]

  • 7. Spontaneous base flipping in DNA and its possible role in methyltransferase binding.
    Chen YZ, Mohan V, Griffey RH.
    Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics; 2000 Jul 22; 62(1 Pt B):1133-7. PubMed ID: 11088571
    [Abstract] [Full Text] [Related]

  • 8. M.HhaI binds tightly to substrates containing mismatches at the target base.
    Klimasauskas S, Roberts RJ.
    Nucleic Acids Res; 1995 Apr 25; 23(8):1388-95. PubMed ID: 7753630
    [Abstract] [Full Text] [Related]

  • 9. Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes.
    O'Gara M, Klimasauskas S, Roberts RJ, Cheng X.
    J Mol Biol; 1996 Sep 06; 261(5):634-45. PubMed ID: 8800212
    [Abstract] [Full Text] [Related]

  • 10. HhaI DNA methyltransferase uses the protruding Gln237 for active flipping of its target cytosine.
    Daujotyte D, Serva S, Vilkaitis G, Merkiene E, Venclovas C, Klimasauskas S.
    Structure; 2004 Jun 06; 12(6):1047-55. PubMed ID: 15274924
    [Abstract] [Full Text] [Related]

  • 11. HhaI methyltransferase flips its target base out of the DNA helix.
    Klimasauskas S, Kumar S, Roberts RJ, Cheng X.
    Cell; 1994 Jan 28; 76(2):357-69. PubMed ID: 8293469
    [Abstract] [Full Text] [Related]

  • 12. The mechanism of DNA cytosine-5 methylation. Kinetic and mutational dissection of Hhai methyltransferase.
    Vilkaitis G, Merkiene E, Serva S, Weinhold E, Klimasauskas S.
    J Biol Chem; 2001 Jun 15; 276(24):20924-34. PubMed ID: 11283006
    [Abstract] [Full Text] [Related]

  • 13. A 7-Deazaadenosylaziridine Cofactor for Sequence-Specific Labeling of DNA by the DNA Cytosine-C5 Methyltransferase M.HhaI.
    Kunkel F, Lurz R, Weinhold E.
    Molecules; 2015 Nov 23; 20(11):20805-22. PubMed ID: 26610450
    [Abstract] [Full Text] [Related]

  • 14. Functional roles of the conserved threonine 250 in the target recognition domain of HhaI DNA methyltransferase.
    Vilkaitis G, Dong A, Weinhold E, Cheng X, Klimasauskas S.
    J Biol Chem; 2000 Dec 08; 275(49):38722-30. PubMed ID: 11102456
    [Abstract] [Full Text] [Related]

  • 15. Investigating the target recognition of DNA cytosine-5 methyltransferase HhaI by library selection using in vitro compartmentalisation.
    Lee YF, Tawfik DS, Griffiths AD.
    Nucleic Acids Res; 2002 Nov 15; 30(22):4937-44. PubMed ID: 12433997
    [Abstract] [Full Text] [Related]

  • 16. Chemical mapping of cytosines enzymatically flipped out of the DNA helix.
    Daujotyte D, Liutkeviciūte Z, Tamulaitis G, Klimasauskas S.
    Nucleic Acids Res; 2008 Jun 15; 36(10):e57. PubMed ID: 18450817
    [Abstract] [Full Text] [Related]

  • 17. Direct observation of cytosine flipping and covalent catalysis in a DNA methyltransferase.
    Gerasimaitė R, Merkienė E, Klimašauskas S.
    Nucleic Acids Res; 2011 May 15; 39(9):3771-80. PubMed ID: 21245034
    [Abstract] [Full Text] [Related]

  • 18. A structural basis for the preferential binding of hemimethylated DNA by HhaI DNA methyltransferase.
    O'Gara M, Roberts RJ, Cheng X.
    J Mol Biol; 1996 Nov 08; 263(4):597-606. PubMed ID: 8918941
    [Abstract] [Full Text] [Related]

  • 19. Distal structural elements coordinate a conserved base flipping network.
    Matje DM, Krivacic CT, Dahlquist FW, Reich NO.
    Biochemistry; 2013 Mar 12; 52(10):1669-76. PubMed ID: 23409802
    [Abstract] [Full Text] [Related]

  • 20. Functional analysis of Gln-237 mutants of HhaI methyltransferase.
    Mi S, Alonso D, Roberts RJ.
    Nucleic Acids Res; 1995 Feb 25; 23(4):620-7. PubMed ID: 7899082
    [Abstract] [Full Text] [Related]

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