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138 related items for PubMed ID: 9565755

  • 1. Protein hydration and unfolding--insights from experimental partial specific volumes and unfolded protein models.
    Murphy LR, Matubayasi N, Payne VA, Levy RM.
    Fold Des; 1998; 3(2):105-18. PubMed ID: 9565755
    [Abstract] [Full Text] [Related]

  • 2. The hydration of globular proteins as derived from volume and compressibility measurements: cross correlating thermodynamic and structural data.
    Chalikian TV, Totrov M, Abagyan R, Breslauer KJ.
    J Mol Biol; 1996 Jul 26; 260(4):588-603. PubMed ID: 8759322
    [Abstract] [Full Text] [Related]

  • 3. On the molecular origins of volumetric data.
    Chalikian TV.
    J Phys Chem B; 2008 Jan 24; 112(3):911-7. PubMed ID: 18171052
    [Abstract] [Full Text] [Related]

  • 4. Decomposition of protein experimental compressibility into intrinsic and hydration shell contributions.
    Dadarlat VM, Post CB.
    Biophys J; 2006 Dec 15; 91(12):4544-54. PubMed ID: 16997864
    [Abstract] [Full Text] [Related]

  • 5. Hydrophobic regions on protein surfaces: definition based on hydration shell structure and a quick method for their computation.
    Eisenhaber F, Argos P.
    Protein Eng; 1996 Dec 15; 9(12):1121-33. PubMed ID: 9010925
    [Abstract] [Full Text] [Related]

  • 6. Studying pressure denaturation of a protein by molecular dynamics simulations.
    Sarupria S, Ghosh T, García AE, Garde S.
    Proteins; 2010 May 15; 78(7):1641-51. PubMed ID: 20146357
    [Abstract] [Full Text] [Related]

  • 7. On the nonpolar hydration free energy of proteins: surface area and continuum solvent models for the solute-solvent interaction energy.
    Levy RM, Zhang LY, Gallicchio E, Felts AK.
    J Am Chem Soc; 2003 Aug 06; 125(31):9523-30. PubMed ID: 12889983
    [Abstract] [Full Text] [Related]

  • 8. Simulation studies of protein folding/unfolding equilibrium under polar and nonpolar confinement.
    Tian J, Garcia AE.
    J Am Chem Soc; 2011 Sep 28; 133(38):15157-64. PubMed ID: 21854029
    [Abstract] [Full Text] [Related]

  • 9. Testing the correlation between delta A and delta V of protein unfolding using m value mutants of staphylococcal nuclease.
    Frye KJ, Perman CS, Royer CA.
    Biochemistry; 1996 Aug 06; 35(31):10234-9. PubMed ID: 8756489
    [Abstract] [Full Text] [Related]

  • 10. Volumetric properties of hydrated peptides: Voronoi-Delaunay analysis of molecular simulation runs.
    Voloshin VP, Medvedev NN, Andrews MN, Burri RR, Winter R, Geiger A.
    J Phys Chem B; 2011 Dec 08; 115(48):14217-28. PubMed ID: 21999345
    [Abstract] [Full Text] [Related]

  • 11. Towards a quantitative understanding of protein hydration and volumetric properties.
    Mitra L, Rouget JB, Garcia-Moreno B, Royer CA, Winter R.
    Chemphyschem; 2008 Dec 22; 9(18):2715-21. PubMed ID: 18814170
    [Abstract] [Full Text] [Related]

  • 12. Partial molar volume of proteins studied by the three-dimensional reference interaction site model theory.
    Imai T, Kovalenko A, Hirata F.
    J Phys Chem B; 2005 Apr 14; 109(14):6658-65. PubMed ID: 16851748
    [Abstract] [Full Text] [Related]

  • 13. Partial volumes and compressibilities of extended polypeptide chains in aqueous solution: additivity scheme and implication of protein unfolding at normal and high pressure.
    Kharakoz DP.
    Biochemistry; 1997 Aug 19; 36(33):10276-85. PubMed ID: 9254626
    [Abstract] [Full Text] [Related]

  • 14. Sensitivity of local hydration behaviour and conformational preferences of peptides to choice of water model.
    Nayar D, Chakravarty C.
    Phys Chem Chem Phys; 2014 Jun 07; 16(21):10199-213. PubMed ID: 24695799
    [Abstract] [Full Text] [Related]

  • 15. The unfolding effects on the protein hydration shell and partial molar volume: a computational study.
    Del Galdo S, Amadei A.
    Phys Chem Chem Phys; 2016 Oct 12; 18(40):28175-28182. PubMed ID: 27711549
    [Abstract] [Full Text] [Related]

  • 16. A molecular dynamics study of the correlations between solvent-accessible surface, molecular volume, and folding state.
    Floriano WB, Domont GB, Nascimento MA.
    J Phys Chem B; 2007 Feb 22; 111(7):1893-9. PubMed ID: 17261064
    [Abstract] [Full Text] [Related]

  • 17. The effect of vicinal polar and charged groups on hydrophobic hydration.
    Cheng YK, Rossky PJ.
    Biopolymers; 1999 Dec 22; 50(7):742-50. PubMed ID: 10547529
    [Abstract] [Full Text] [Related]

  • 18. Characterization of pH-induced transitions of beta-lactoglobulin: ultrasonic, densimetric, and spectroscopic studies.
    Taulier N, Chalikian TV.
    J Mol Biol; 2001 Dec 07; 314(4):873-89. PubMed ID: 11734004
    [Abstract] [Full Text] [Related]

  • 19. Contribution of hydration to protein folding thermodynamics. I. The enthalpy of hydration.
    Makhatadze GI, Privalov PL.
    J Mol Biol; 1993 Jul 20; 232(2):639-59. PubMed ID: 8393940
    [Abstract] [Full Text] [Related]

  • 20. Volumetric characterizations of the native, molten globule and unfolded states of cytochrome c at acidic pH.
    Chalikian TV, Gindikin VS, Breslauer KJ.
    J Mol Biol; 1995 Jul 07; 250(2):291-306. PubMed ID: 7608975
    [Abstract] [Full Text] [Related]

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