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Journal Abstract Search

155 related items for PubMed ID: 9577228

  • 21. Efficient approximate all-atom solvent accessible surface area method parameterized for folded and denatured protein conformations.
    Guvench O, Brooks CL.
    J Comput Chem; 2004 Jun; 25(8):1005-14. PubMed ID: 15067676
    [Abstract] [Full Text] [Related]

  • 22. Hydration of protein-protein interfaces.
    Rodier F, Bahadur RP, Chakrabarti P, Janin J.
    Proteins; 2005 Jul 01; 60(1):36-45. PubMed ID: 15856483
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  • 25. Divisive effect of alcohol-water mixed solvents on growth morphology of calcium carbonate crystals.
    Zhang L, Yue LH, Wang F, Wang Q.
    J Phys Chem B; 2008 Aug 28; 112(34):10668-74. PubMed ID: 18681476
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  • 28. Accounting for solvent in structure-based drug design.
    Tari LW.
    Methods Mol Biol; 2012 Aug 28; 841():251-66. PubMed ID: 22222456
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  • 29. Understanding dynamics of myoglobin in heterogeneous aqueous environments using coupled water fractions.
    Muthuselvi L, Dhathathreyan A.
    Adv Colloid Interface Sci; 2009 Sep 30; 150(2):55-62. PubMed ID: 19442960
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  • 30. AGBNP: an analytic implicit solvent model suitable for molecular dynamics simulations and high-resolution modeling.
    Gallicchio E, Levy RM.
    J Comput Chem; 2004 Mar 30; 25(4):479-99. PubMed ID: 14735568
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  • 32. Hydration dynamics and time scales of coupled water-protein fluctuations.
    Li T, Hassanali AA, Kao YT, Zhong D, Singer SJ.
    J Am Chem Soc; 2007 Mar 21; 129(11):3376-82. PubMed ID: 17319669
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  • 33. Hydration in proteins observed by high-resolution neutron crystallography.
    Chatake T, Ostermann A, Kurihara K, Parak FG, Niimura N.
    Proteins; 2003 Feb 15; 50(3):516-23. PubMed ID: 12557193
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  • 34. Analysis of ligand-bound water molecules in high-resolution crystal structures of protein-ligand complexes.
    Lu Y, Wang R, Yang CY, Wang S.
    J Chem Inf Model; 2007 Feb 15; 47(2):668-75. PubMed ID: 17266298
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  • 35. The protein "glass" transition and the role of the solvent.
    Ngai KL, Capaccioli S, Shinyashiki N.
    J Phys Chem B; 2008 Mar 27; 112(12):3826-32. PubMed ID: 18318525
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  • 36. Large-scale networks of hydration water molecules around bovine beta-trypsin revealed by cryogenic X-ray crystal structure analysis.
    Nakasako M.
    J Mol Biol; 1999 Jun 11; 289(3):547-64. PubMed ID: 10356328
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  • 37. Static and dynamic water molecules in Cu,Zn superoxide dismutase.
    Falconi M, Brunelli M, Pesce A, Ferrario M, Bolognesi M, Desideri A.
    Proteins; 2003 Jun 01; 51(4):607-15. PubMed ID: 12784219
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  • 38. Modeling of the water network at protein-RNA interfaces.
    Li Y, Sutch BT, Bui HH, Gallaher TK, Haworth IS.
    J Chem Inf Model; 2011 Jun 27; 51(6):1347-52. PubMed ID: 21612274
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  • 39. Comparison of DNA hydration patterns obtained using two distinct computational methods, molecular dynamics simulation and three-dimensional reference interaction site model theory.
    Yonetani Y, Maruyama Y, Hirata F, Kono H.
    J Chem Phys; 2008 May 14; 128(18):185102. PubMed ID: 18532849
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  • 40. Grand canonical Monte Carlo simulations of water in protein environments.
    Woo HJ, Dinner AR, Roux B.
    J Chem Phys; 2004 Oct 01; 121(13):6392-400. PubMed ID: 15446937
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