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Journal Abstract Search


281 related items for PubMed ID: 9669557

  • 1. An RNA model system for investigation of pseudouridine stabilization of the codon-anticodon interaction in tRNALys, tRNAHis and tRNATyr.
    Davis DR, Veltri CA, Nielsen L.
    J Biomol Struct Dyn; 1998 Jun; 15(6):1121-32. PubMed ID: 9669557
    [Abstract] [Full Text] [Related]

  • 2. The effect of pseudouridine and pH on the structure and dynamics of the anticodon stem-loop of tRNA(Lys,3).
    Durant PC, Davis DR.
    Nucleic Acids Symp Ser; 1997 Jun; (36):56-7. PubMed ID: 9478205
    [Abstract] [Full Text] [Related]

  • 3. Stabilization of the anticodon stem-loop of tRNALys,3 by an A+-C base-pair and by pseudouridine.
    Durant PC, Davis DR.
    J Mol Biol; 1999 Jan 08; 285(1):115-31. PubMed ID: 9878393
    [Abstract] [Full Text] [Related]

  • 4. Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.
    Durant PC, Bajji AC, Sundaram M, Kumar RK, Davis DR.
    Biochemistry; 2005 Jun 07; 44(22):8078-89. PubMed ID: 15924427
    [Abstract] [Full Text] [Related]

  • 5. Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.
    Sundaram M, Durant PC, Davis DR.
    Biochemistry; 2000 Oct 17; 39(41):12575-84. PubMed ID: 11027137
    [Abstract] [Full Text] [Related]

  • 6. The effect of queuosine on tRNA structure and function.
    Morris RC, Brown KG, Elliott MS.
    J Biomol Struct Dyn; 1999 Feb 17; 16(4):757-74. PubMed ID: 10217448
    [Abstract] [Full Text] [Related]

  • 7. Synthesis and characterization of the native anticodon domain of E. coli TRNA(Lys): simultaneous incorporation of modified nucleosides mnm(5)s(2)U, t(6)A, and pseudouridine using phosphoramidite chemistry.
    Sundaram M, Crain PF, Davis DR.
    J Org Chem; 2000 Sep 08; 65(18):5609-14. PubMed ID: 10970299
    [Abstract] [Full Text] [Related]

  • 8. Human tRNA(Lys3)(UUU) is pre-structured by natural modifications for cognate and wobble codon binding through keto-enol tautomerism.
    Vendeix FA, Murphy FV, Cantara WA, Leszczyńska G, Gustilo EM, Sproat B, Malkiewicz A, Agris PF.
    J Mol Biol; 2012 Mar 02; 416(4):467-85. PubMed ID: 22227389
    [Abstract] [Full Text] [Related]

  • 9. Pseudouridine in the anticodon G psi A of plant cytoplasmic tRNA(Tyr) is required for UAG and UAA suppression in the TMV-specific context.
    Zerfass K, Beier H.
    Nucleic Acids Res; 1992 Nov 25; 20(22):5911-8. PubMed ID: 1461724
    [Abstract] [Full Text] [Related]

  • 10. Nucleoside modifications affect the structure and stability of the anticodon of tRNA(Lys,3).
    Davis DR, Durant PC.
    Nucleosides Nucleotides; 1999 Nov 25; 18(6-7):1579-81. PubMed ID: 10474235
    [Abstract] [Full Text] [Related]

  • 11. Synthesis and studies on the effect of 2-thiouridine and 4-thiouridine on sugar conformation and RNA duplex stability.
    Kumar RK, Davis DR.
    Nucleic Acids Res; 1997 Mar 15; 25(6):1272-80. PubMed ID: 9092639
    [Abstract] [Full Text] [Related]

  • 12. Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.
    Yarian C, Marszalek M, Sochacka E, Malkiewicz A, Guenther R, Miskiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13390-5. PubMed ID: 11063576
    [Abstract] [Full Text] [Related]

  • 13. Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.
    Stuart JW, Gdaniec Z, Guenther R, Marszalek M, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13396-404. PubMed ID: 11063577
    [Abstract] [Full Text] [Related]

  • 14. Conformation effects of base modification on the anticodon stem-loop of Bacillus subtilis tRNA(Tyr).
    Denmon AP, Wang J, Nikonowicz EP.
    J Mol Biol; 2011 Sep 16; 412(2):285-303. PubMed ID: 21782828
    [Abstract] [Full Text] [Related]

  • 15. The structure of the human tRNALys3 anticodon bound to the HIV genome is stabilized by modified nucleosides and adjacent mismatch base pairs.
    Bilbille Y, Vendeix FA, Guenther R, Malkiewicz A, Ariza X, Vilarrasa J, Agris PF.
    Nucleic Acids Res; 2009 Jun 16; 37(10):3342-53. PubMed ID: 19324888
    [Abstract] [Full Text] [Related]

  • 16. All human tRNATyr genes contain introns as a prerequisite for pseudouridine biosynthesis in the anticodon.
    van Tol H, Beier H.
    Nucleic Acids Res; 1988 Mar 25; 16(5):1951-66. PubMed ID: 3357766
    [Abstract] [Full Text] [Related]

  • 17. The modified wobble base inosine in yeast tRNAIle is a positive determinant for aminoacylation by isoleucyl-tRNA synthetase.
    Senger B, Auxilien S, Englisch U, Cramer F, Fasiolo F.
    Biochemistry; 1997 Jul 08; 36(27):8269-75. PubMed ID: 9204872
    [Abstract] [Full Text] [Related]

  • 18. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 19. The uridine to pseudouridine modification at the wobble position of eukaryotic isoleucine tRNA species is unlikely to induce mistranslation.
    Takai K.
    Nucleosides Nucleotides Nucleic Acids; 2022 Jun 21; 41(2):137-153. PubMed ID: 34852733
    [Abstract] [Full Text] [Related]

  • 20. Stabilization of RNA stacking by pseudouridine.
    Davis DR.
    Nucleic Acids Res; 1995 Dec 25; 23(24):5020-6. PubMed ID: 8559660
    [Abstract] [Full Text] [Related]


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