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PUBMED FOR HANDHELDS

Journal Abstract Search


121 related items for PubMed ID: 9741843

  • 21. Contribution to antibody-antigen interaction of structurally perturbed antigenic residues upon antibody binding.
    Tsumoto K, Ueda Y, Maenaka K, Watanabe K, Ogasahara K, Yutani K, Kumagai I.
    J Biol Chem; 1994 Nov 18; 269(46):28777-82. PubMed ID: 7961832
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  • 22. Contribution of asparagine residues to the stabilization of a proteinaceous antigen-antibody complex, HyHEL-10-hen egg white lysozyme.
    Yokota A, Tsumoto K, Shiroishi M, Nakanishi T, Kondo H, Kumagai I.
    J Biol Chem; 2010 Mar 05; 285(10):7686-96. PubMed ID: 20038580
    [Abstract] [Full Text] [Related]

  • 23. Calculating proton uptake/release and binding free energy taking into account ionization and conformation changes induced by protein-inhibitor association: application to plasmepsin, cathepsin D and endothiapepsin-pepstatin complexes.
    Alexov E.
    Proteins; 2004 Aug 15; 56(3):572-84. PubMed ID: 15229889
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  • 24. Mutations in the complementarity-determining regions do not cause differences in free energy during the process of formation of the activated complex between an antibody and the corresponding protein antigen.
    Ito W, Yasui H, Kurosawa Y.
    J Mol Biol; 1995 May 12; 248(4):729-32. PubMed ID: 7752235
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  • 25. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins.
    Avbelj F.
    J Mol Biol; 2000 Jul 28; 300(5):1335-59. PubMed ID: 10903873
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  • 28. Molecular dynamics simulation of a high-affinity antibody-protein complex: the binding site is a mosaic of locally flexible and preorganized rigid regions.
    Sinha N, Smith-Gill SJ.
    Cell Biochem Biophys; 2005 Jul 28; 43(2):253-73. PubMed ID: 16049350
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  • 29. pKa calculations in solution and proteins with QM/MM free energy perturbation simulations: a quantitative test of QM/MM protocols.
    Riccardi D, Schaefer P, Cui Q.
    J Phys Chem B; 2005 Sep 22; 109(37):17715-33. PubMed ID: 16853267
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  • 30. Affinity maturation increases the stability and plasticity of the Fv domain of anti-protein antibodies.
    Acierno JP, Braden BC, Klinke S, Goldbaum FA, Cauerhff A.
    J Mol Biol; 2007 Nov 16; 374(1):130-46. PubMed ID: 17916365
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  • 31. Reduction in the amide hydrogen exchange rates of an anti-lysozyme Fv fragment due to formation of the Fv-lysozyme complex.
    Williams DC, Rule GS, Poljak RJ, Benjamin DC.
    J Mol Biol; 1997 Aug 01; 270(5):751-62. PubMed ID: 9245602
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  • 32. Association of the anti-hen egg lysozyme antibody HyHEL-5 with avian species variant and mutant lysozymes.
    Shick KA, Xavier KA, Rajpal A, Smith-Gill SJ, Willson RC.
    Biochim Biophys Acta; 1997 Jul 18; 1340(2):205-14. PubMed ID: 9252107
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  • 33. Estimation of the hydrophobic effect in an antigen-antibody protein-protein interface.
    Sundberg EJ, Urrutia M, Braden BC, Isern J, Tsuchiya D, Fields BA, Malchiodi EL, Tormo J, Schwarz FP, Mariuzza RA.
    Biochemistry; 2000 Dec 19; 39(50):15375-87. PubMed ID: 11112523
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  • 35. On the attribution of binding energy in antigen-antibody complexes McPC 603, D1.3, and HyHEL-5.
    Novotny J, Bruccoleri RE, Saul FA.
    Biochemistry; 1989 May 30; 28(11):4735-49. PubMed ID: 2475171
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  • 36. Salt links dominate affinity of antibody HyHEL-5 for lysozyme through enthalpic contributions.
    Wibbenmeyer JA, Schuck P, Smith-Gill SJ, Willson RC.
    J Biol Chem; 1999 Sep 17; 274(38):26838-42. PubMed ID: 10480891
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  • 38. Energetic analysis of an antigen/antibody interface: alanine scanning mutagenesis and double mutant cycles on the HyHEL-10/lysozyme interaction.
    Pons J, Rajpal A, Kirsch JF.
    Protein Sci; 1999 May 17; 8(5):958-68. PubMed ID: 10338006
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  • 39. Pressure-induced dissociation of antigen-antibody complexes.
    Sundaram S, Roth CM, Yarmush ML.
    Biotechnol Prog; 1998 May 17; 14(5):773-81. PubMed ID: 9758668
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  • 40. X-ray snapshots of the maturation of an antibody response to a protein antigen.
    Li Y, Li H, Yang F, Smith-Gill SJ, Mariuzza RA.
    Nat Struct Biol; 2003 Jun 17; 10(6):482-8. PubMed ID: 12740607
    [Abstract] [Full Text] [Related]


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